Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CLDN2P57739 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CLDN2P57739 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.19■□□□□ 0.98
CLDN2P57739 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.19■□□□□ 0.98
CLDN2P57739 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLDN2P57739 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN2P57739 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.19■□□□□ 0.98
CLDN2P57739 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLDN2P57739 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN2P57739 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN2P57739 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN2P57739 AC139530.1-201ENST00000575312 1977 ntBASIC21.19■□□□□ 0.98
CLDN2P57739 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN2P57739 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN2P57739 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN2P57739 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CLDN2P57739 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN2P57739 AP006587.3-201ENST00000525742 1516 ntBASIC21.19■□□□□ 0.98
CLDN2P57739 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CLDN2P57739 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN2P57739 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN2P57739 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN2P57739 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN2P57739 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN2P57739 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN2P57739 C9orf163-202ENST00000624034 2573 ntBASIC21.18■□□□□ 0.98
CLDN2P57739 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN2P57739 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN2P57739 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN2P57739 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CLDN2P57739 AC104771.1-201ENST00000603335 964 ntBASIC21.17■□□□□ 0.98
CLDN2P57739 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.17■□□□□ 0.98
CLDN2P57739 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
CLDN2P57739 MYCNOS-205ENST00000641950 531 ntBASIC21.17■□□□□ 0.98
CLDN2P57739 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN2P57739 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN2P57739 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN2P57739 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN2P57739 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CLDN2P57739 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN2P57739 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLDN2P57739 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN2P57739 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN2P57739 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN2P57739 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLDN2P57739 AC010141.2-201ENST00000452426 721 ntBASIC21.16■□□□□ 0.98
CLDN2P57739 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN2P57739 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN2P57739 DUX4L16-201ENST00000555130 1264 ntBASIC21.16■□□□□ 0.98
CLDN2P57739 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN2P57739 AC138907.5-202ENST00000569484 235 ntBASIC21.16■□□□□ 0.98
CLDN2P57739 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN2P57739 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN2P57739 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN2P57739 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CLDN2P57739 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN2P57739 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN2P57739 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.15■□□□□ 0.98
CLDN2P57739 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDN2P57739 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.15■□□□□ 0.98
CLDN2P57739 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN2P57739 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN2P57739 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.14■□□□□ 0.98
CLDN2P57739 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.14■□□□□ 0.98
CLDN2P57739 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN2P57739 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.14■□□□□ 0.98
CLDN2P57739 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDN2P57739 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.14■□□□□ 0.97
CLDN2P57739 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN2P57739 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN2P57739 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN2P57739 NCF1B-203ENST00000435988 1254 ntBASIC21.14■□□□□ 0.97
CLDN2P57739 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CLDN2P57739 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDN2P57739 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.14■□□□□ 0.97
CLDN2P57739 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CLDN2P57739 AL109923.1-201ENST00000618799 583 ntBASIC21.14■□□□□ 0.97
CLDN2P57739 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms