Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.67■■□□□ 1.06
WNT3AP56704 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
WNT3AP56704 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3AP56704 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
WNT3AP56704 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
WNT3AP56704 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3AP56704 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
WNT3AP56704 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.66■■□□□ 1.06
WNT3AP56704 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3AP56704 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3AP56704 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3AP56704 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.66■■□□□ 1.06
WNT3AP56704 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.66■■□□□ 1.06
WNT3AP56704 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.66■■□□□ 1.06
WNT3AP56704 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3AP56704 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3AP56704 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
WNT3AP56704 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.66■■□□□ 1.06
WNT3AP56704 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3AP56704 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
WNT3AP56704 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.65■■□□□ 1.06
WNT3AP56704 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.65■■□□□ 1.06
WNT3AP56704 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
WNT3AP56704 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3AP56704 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.65■■□□□ 1.06
WNT3AP56704 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.65■■□□□ 1.06
WNT3AP56704 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.65■■□□□ 1.06
WNT3AP56704 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
WNT3AP56704 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.65■■□□□ 1.06
WNT3AP56704 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3AP56704 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3AP56704 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
WNT3AP56704 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.64■■□□□ 1.06
WNT3AP56704 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.64■■□□□ 1.06
WNT3AP56704 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.64■■□□□ 1.06
WNT3AP56704 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
WNT3AP56704 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
WNT3AP56704 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
WNT3AP56704 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
WNT3AP56704 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.64■■□□□ 1.05
WNT3AP56704 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
WNT3AP56704 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.64■■□□□ 1.05
WNT3AP56704 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.64■■□□□ 1.05
WNT3AP56704 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
WNT3AP56704 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
WNT3AP56704 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
WNT3AP56704 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
WNT3AP56704 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.64■■□□□ 1.05
WNT3AP56704 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
WNT3AP56704 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.63■■□□□ 1.05
WNT3AP56704 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.63■■□□□ 1.05
WNT3AP56704 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.63■■□□□ 1.05
WNT3AP56704 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
WNT3AP56704 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3AP56704 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3AP56704 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3AP56704 BX005040.4-201ENST00000637145 1518 ntBASIC21.62■■□□□ 1.05
WNT3AP56704 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.62■■□□□ 1.05
WNT3AP56704 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.62■■□□□ 1.05
WNT3AP56704 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.62■■□□□ 1.05
WNT3AP56704 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.62■■□□□ 1.05
WNT3AP56704 AC012414.1-201ENST00000556676 535 ntBASIC21.62■■□□□ 1.05
WNT3AP56704 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.62■■□□□ 1.05
WNT3AP56704 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.62■■□□□ 1.05
WNT3AP56704 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
WNT3AP56704 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3AP56704 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.62■■□□□ 1.05
WNT3AP56704 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
WNT3AP56704 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
WNT3AP56704 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
WNT3AP56704 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
WNT3AP56704 AP006587.3-201ENST00000525742 1516 ntBASIC21.61■■□□□ 1.05
WNT3AP56704 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
WNT3AP56704 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
WNT3AP56704 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.61■■□□□ 1.05
WNT3AP56704 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
WNT3AP56704 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
WNT3AP56704 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.6■■□□□ 1.05
WNT3AP56704 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
WNT3AP56704 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 IRS3P-201ENST00000223076 1006 ntBASIC21.6■■□□□ 1.05
WNT3AP56704 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
WNT3AP56704 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
WNT3AP56704 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
WNT3AP56704 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.6■■□□□ 1.05
WNT3AP56704 AL354811.1-201ENST00000610286 706 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms