Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PER3P56645 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PER3P56645 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.71■□□□□ 0.75
PER3P56645 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.71■□□□□ 0.75
PER3P56645 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PER3P56645 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PER3P56645 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PER3P56645 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PER3P56645 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PER3P56645 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.74
PER3P56645 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PER3P56645 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PER3P56645 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PER3P56645 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PER3P56645 AC079630.1-202ENST00000618127 1840 ntBASIC19.7■□□□□ 0.74
PER3P56645 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PER3P56645 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.7■□□□□ 0.74
PER3P56645 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.7■□□□□ 0.74
PER3P56645 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.7■□□□□ 0.74
PER3P56645 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PER3P56645 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
PER3P56645 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.69■□□□□ 0.74
PER3P56645 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.69■□□□□ 0.74
PER3P56645 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.69■□□□□ 0.74
PER3P56645 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.69■□□□□ 0.74
PER3P56645 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.69■□□□□ 0.74
PER3P56645 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PER3P56645 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PER3P56645 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PER3P56645 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PER3P56645 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PER3P56645 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PER3P56645 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PER3P56645 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
PER3P56645 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PER3P56645 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.68■□□□□ 0.74
PER3P56645 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.68■□□□□ 0.74
PER3P56645 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.68■□□□□ 0.74
PER3P56645 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.68■□□□□ 0.74
PER3P56645 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PER3P56645 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PER3P56645 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PER3P56645 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PER3P56645 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PER3P56645 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PER3P56645 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PER3P56645 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.67■□□□□ 0.74
PER3P56645 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.67■□□□□ 0.74
PER3P56645 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.67■□□□□ 0.74
PER3P56645 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PER3P56645 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PER3P56645 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PER3P56645 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PER3P56645 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PER3P56645 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PER3P56645 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.66■□□□□ 0.74
PER3P56645 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.66■□□□□ 0.74
PER3P56645 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PER3P56645 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.66■□□□□ 0.74
PER3P56645 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.66■□□□□ 0.74
PER3P56645 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.66■□□□□ 0.74
PER3P56645 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
PER3P56645 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.66■□□□□ 0.74
PER3P56645 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.66■□□□□ 0.74
PER3P56645 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.66■□□□□ 0.74
PER3P56645 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PER3P56645 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.66■□□□□ 0.74
PER3P56645 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PER3P56645 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.65■□□□□ 0.74
PER3P56645 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PER3P56645 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.65■□□□□ 0.74
PER3P56645 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PER3P56645 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PER3P56645 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PER3P56645 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PER3P56645 NCF1B-203ENST00000435988 1254 ntBASIC19.65■□□□□ 0.74
PER3P56645 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.65■□□□□ 0.74
PER3P56645 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.65■□□□□ 0.74
PER3P56645 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.65■□□□□ 0.74
PER3P56645 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.65■□□□□ 0.74
PER3P56645 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PER3P56645 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms