Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.43■□□□□ 0.7
SUMO3P55854 AC104564.3-201ENST00000582367 638 ntBASIC19.43■□□□□ 0.7
SUMO3P55854 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SUMO3P55854 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SUMO3P55854 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SUMO3P55854 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SUMO3P55854 LINC02228-203ENST00000641970 1355 ntBASIC19.43■□□□□ 0.7
SUMO3P55854 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.42■□□□□ 0.7
SUMO3P55854 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.42■□□□□ 0.7
SUMO3P55854 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.42■□□□□ 0.7
SUMO3P55854 AC019069.1-201ENST00000610008 1333 ntBASIC19.42■□□□□ 0.7
SUMO3P55854 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SUMO3P55854 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUMO3P55854 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
SUMO3P55854 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUMO3P55854 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUMO3P55854 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SUMO3P55854 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.41■□□□□ 0.7
SUMO3P55854 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUMO3P55854 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SUMO3P55854 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
SUMO3P55854 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.41■□□□□ 0.7
SUMO3P55854 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUMO3P55854 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUMO3P55854 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUMO3P55854 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
SUMO3P55854 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.4■□□□□ 0.7
SUMO3P55854 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.4■□□□□ 0.7
SUMO3P55854 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SUMO3P55854 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.4■□□□□ 0.7
SUMO3P55854 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.4■□□□□ 0.7
SUMO3P55854 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.4■□□□□ 0.7
SUMO3P55854 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.4■□□□□ 0.7
SUMO3P55854 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.4■□□□□ 0.7
SUMO3P55854 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.4■□□□□ 0.7
SUMO3P55854 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.4■□□□□ 0.7
SUMO3P55854 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.4■□□□□ 0.7
SUMO3P55854 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SUMO3P55854 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUMO3P55854 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SUMO3P55854 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUMO3P55854 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUMO3P55854 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.39■□□□□ 0.69
SUMO3P55854 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUMO3P55854 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.39■□□□□ 0.69
SUMO3P55854 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SUMO3P55854 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUMO3P55854 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
SUMO3P55854 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUMO3P55854 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.39■□□□□ 0.69
SUMO3P55854 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SUMO3P55854 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUMO3P55854 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
SUMO3P55854 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SUMO3P55854 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SUMO3P55854 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SUMO3P55854 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUMO3P55854 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SUMO3P55854 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUMO3P55854 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SUMO3P55854 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.38■□□□□ 0.69
SUMO3P55854 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.38■□□□□ 0.69
SUMO3P55854 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.38■□□□□ 0.69
SUMO3P55854 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.38■□□□□ 0.69
SUMO3P55854 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.38■□□□□ 0.69
SUMO3P55854 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SUMO3P55854 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.38■□□□□ 0.69
SUMO3P55854 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SUMO3P55854 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SUMO3P55854 AC003102.1-202ENST00000563394 1796 ntBASIC19.37■□□□□ 0.69
SUMO3P55854 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
SUMO3P55854 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.37■□□□□ 0.69
SUMO3P55854 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SUMO3P55854 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SUMO3P55854 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms