Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ECEL1P1-201ENST00000373592 1742 ntBASIC21.95■■□□□ 1.1
CDH4P55283 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH4P55283 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH4P55283 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
CDH4P55283 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH4P55283 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.95■■□□□ 1.1
CDH4P55283 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CDH4P55283 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH4P55283 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.95■■□□□ 1.1
CDH4P55283 AP004607.4-201ENST00000530158 1459 ntBASIC21.95■■□□□ 1.1
CDH4P55283 KRT87P-202ENST00000534226 1464 ntBASIC21.95■■□□□ 1.1
CDH4P55283 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH4P55283 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.95■■□□□ 1.1
CDH4P55283 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH4P55283 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH4P55283 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH4P55283 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.94■■□□□ 1.1
CDH4P55283 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CDH4P55283 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.94■■□□□ 1.1
CDH4P55283 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.94■■□□□ 1.1
CDH4P55283 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
CDH4P55283 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.94■■□□□ 1.1
CDH4P55283 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.94■■□□□ 1.1
CDH4P55283 AC104564.3-201ENST00000582367 638 ntBASIC21.94■■□□□ 1.1
CDH4P55283 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.94■■□□□ 1.1
CDH4P55283 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.94■■□□□ 1.1
CDH4P55283 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.94■■□□□ 1.1
CDH4P55283 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDH4P55283 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH4P55283 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CDH4P55283 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.93■■□□□ 1.1
CDH4P55283 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.93■■□□□ 1.1
CDH4P55283 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDH4P55283 AC004854.2-201ENST00000608450 1441 ntBASIC21.93■■□□□ 1.1
CDH4P55283 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH4P55283 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH4P55283 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDH4P55283 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH4P55283 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH4P55283 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH4P55283 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH4P55283 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CDH4P55283 KRT18P61-201ENST00000585825 1298 ntBASIC21.92■■□□□ 1.1
CDH4P55283 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDH4P55283 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH4P55283 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH4P55283 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH4P55283 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH4P55283 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH4P55283 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH4P55283 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
CDH4P55283 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH4P55283 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.91■■□□□ 1.1
CDH4P55283 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDH4P55283 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
CDH4P55283 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH4P55283 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH4P55283 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH4P55283 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.9■■□□□ 1.1
CDH4P55283 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH4P55283 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.9■■□□□ 1.1
CDH4P55283 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.9■■□□□ 1.1
CDH4P55283 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH4P55283 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH4P55283 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CDH4P55283 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH4P55283 AL117328.2-201ENST00000624617 1940 ntBASIC21.9■■□□□ 1.1
CDH4P55283 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH4P55283 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH4P55283 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH4P55283 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH4P55283 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDH4P55283 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH4P55283 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH4P55283 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDH4P55283 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH4P55283 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDH4P55283 FAM99A-202ENST00000538190 1989 ntBASIC21.89■■□□□ 1.09
CDH4P55283 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CDH4P55283 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.89■■□□□ 1.09
CDH4P55283 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms