Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR2JP52435 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR2JP52435 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR2JP52435 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
POLR2JP52435 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR2JP52435 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.45■□□□□ 0.86
POLR2JP52435 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR2JP52435 AC099791.2-201ENST00000605725 427 ntBASIC20.45■□□□□ 0.86
POLR2JP52435 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR2JP52435 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2JP52435 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR2JP52435 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR2JP52435 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR2JP52435 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
POLR2JP52435 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.44■□□□□ 0.86
POLR2JP52435 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR2JP52435 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
POLR2JP52435 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR2JP52435 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR2JP52435 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
POLR2JP52435 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.44■□□□□ 0.86
POLR2JP52435 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
POLR2JP52435 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2JP52435 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2JP52435 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2JP52435 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2JP52435 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2JP52435 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2JP52435 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2JP52435 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2JP52435 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.43■□□□□ 0.86
POLR2JP52435 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2JP52435 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
POLR2JP52435 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.43■□□□□ 0.86
POLR2JP52435 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.43■□□□□ 0.86
POLR2JP52435 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
POLR2JP52435 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR2JP52435 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.42■□□□□ 0.86
POLR2JP52435 AC087239.1-201ENST00000622671 572 ntBASIC20.42■□□□□ 0.86
POLR2JP52435 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.42■□□□□ 0.86
POLR2JP52435 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
POLR2JP52435 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
POLR2JP52435 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.41■□□□□ 0.86
POLR2JP52435 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2JP52435 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2JP52435 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2JP52435 AC073130.3-201ENST00000624389 2278 ntBASIC20.41■□□□□ 0.86
POLR2JP52435 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
POLR2JP52435 MIR3181-201ENST00000578512 73 ntBASIC20.41■□□□□ 0.86
POLR2JP52435 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2JP52435 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.41■□□□□ 0.86
POLR2JP52435 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.41■□□□□ 0.86
POLR2JP52435 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR2JP52435 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.41■□□□□ 0.86
POLR2JP52435 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2JP52435 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2JP52435 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2JP52435 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2JP52435 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2JP52435 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2JP52435 KRT16P3-201ENST00000439127 1283 ntBASIC20.4■□□□□ 0.86
POLR2JP52435 OR2I1P-207ENST00000453522 948 ntBASIC20.4■□□□□ 0.86
POLR2JP52435 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2JP52435 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR2JP52435 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR2JP52435 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
POLR2JP52435 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR2JP52435 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR2JP52435 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR2JP52435 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR2JP52435 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
POLR2JP52435 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR2JP52435 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2JP52435 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR2JP52435 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR2JP52435 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
POLR2JP52435 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2JP52435 AC010141.3-201ENST00000456659 717 ntBASIC20.39■□□□□ 0.85
POLR2JP52435 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
POLR2JP52435 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR2JP52435 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2JP52435 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms