Protein–RNA interactions for Protein: P52209

PGD, 6-phosphogluconate dehydrogenase, decarboxylating, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGDP52209 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGDP52209 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGDP52209 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PGDP52209 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGDP52209 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PGDP52209 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.29■□□□□ 0.84
PGDP52209 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.29■□□□□ 0.84
PGDP52209 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.29■□□□□ 0.84
PGDP52209 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.29■□□□□ 0.84
PGDP52209 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.29■□□□□ 0.84
PGDP52209 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.29■□□□□ 0.84
PGDP52209 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PGDP52209 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.29■□□□□ 0.84
PGDP52209 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
PGDP52209 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PGDP52209 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PGDP52209 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGDP52209 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.28■□□□□ 0.84
PGDP52209 AC137767.1-201ENST00000602918 1920 ntBASIC20.28■□□□□ 0.84
PGDP52209 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PGDP52209 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PGDP52209 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.28■□□□□ 0.84
PGDP52209 TPRG1LP1-201ENST00000598702 760 ntBASIC20.28■□□□□ 0.84
PGDP52209 AC073111.5-205ENST00000641717 521 ntBASIC20.28■□□□□ 0.84
PGDP52209 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGDP52209 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGDP52209 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.28■□□□□ 0.84
PGDP52209 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PGDP52209 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PGDP52209 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.27■□□□□ 0.84
PGDP52209 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.27■□□□□ 0.84
PGDP52209 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.27■□□□□ 0.84
PGDP52209 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.27■□□□□ 0.84
PGDP52209 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.27■□□□□ 0.84
PGDP52209 KRT18P61-201ENST00000585825 1298 ntBASIC20.27■□□□□ 0.84
PGDP52209 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 BID-214ENST00000617586 542 ntTSL 5 BASIC20.27■□□□□ 0.84
PGDP52209 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGDP52209 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PGDP52209 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGDP52209 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGDP52209 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGDP52209 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGDP52209 CDCA4P2-201ENST00000441182 718 ntBASIC20.26■□□□□ 0.83
PGDP52209 AC079089.2-201ENST00000531211 1277 ntBASIC20.26■□□□□ 0.83
PGDP52209 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGDP52209 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGDP52209 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PGDP52209 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGDP52209 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
PGDP52209 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGDP52209 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PGDP52209 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.25■□□□□ 0.83
PGDP52209 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.25■□□□□ 0.83
PGDP52209 AC080038.3-201ENST00000623346 1952 ntBASIC20.25■□□□□ 0.83
PGDP52209 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 KRT19P1-201ENST00000405746 1186 ntBASIC20.25■□□□□ 0.83
PGDP52209 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 AC026185.1-201ENST00000445748 174 ntBASIC20.25■□□□□ 0.83
PGDP52209 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.25■□□□□ 0.83
PGDP52209 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.25■□□□□ 0.83
PGDP52209 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PGDP52209 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGDP52209 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.24■□□□□ 0.83
PGDP52209 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PGDP52209 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGDP52209 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
PGDP52209 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PGDP52209 AC127496.7-201ENST00000625110 1798 ntBASIC20.24■□□□□ 0.83
PGDP52209 BX005040.4-201ENST00000637145 1518 ntBASIC20.24■□□□□ 0.83
PGDP52209 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGDP52209 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGDP52209 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms