Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDR1P51861 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.27■■□□□ 1.32
CDR1P51861 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDR1P51861 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDR1P51861 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CDR1P51861 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.27■■□□□ 1.32
CDR1P51861 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CDR1P51861 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CDR1P51861 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.26■■□□□ 1.31
CDR1P51861 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDR1P51861 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDR1P51861 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDR1P51861 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDR1P51861 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CDR1P51861 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDR1P51861 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.26■■□□□ 1.31
CDR1P51861 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.26■■□□□ 1.31
CDR1P51861 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.26■■□□□ 1.31
CDR1P51861 AP005435.1-201ENST00000529293 1178 ntBASIC23.26■■□□□ 1.31
CDR1P51861 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.26■■□□□ 1.31
CDR1P51861 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.26■■□□□ 1.31
CDR1P51861 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDR1P51861 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
CDR1P51861 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDR1P51861 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.26■■□□□ 1.31
CDR1P51861 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CDR1P51861 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CDR1P51861 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.25■■□□□ 1.31
CDR1P51861 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.25■■□□□ 1.31
CDR1P51861 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
CDR1P51861 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CDR1P51861 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.25■■□□□ 1.31
CDR1P51861 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.25■■□□□ 1.31
CDR1P51861 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDR1P51861 ECEL1P1-201ENST00000373592 1742 ntBASIC23.25■■□□□ 1.31
CDR1P51861 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CDR1P51861 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 DUSP8P3-201ENST00000399571 1760 ntBASIC23.24■■□□□ 1.31
CDR1P51861 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.24■■□□□ 1.31
CDR1P51861 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.24■■□□□ 1.31
CDR1P51861 DUX4L2-201ENST00000561772 1275 ntBASIC23.24■■□□□ 1.31
CDR1P51861 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.24■■□□□ 1.31
CDR1P51861 DUX4L6-201ENST00000626483 1275 ntBASIC23.24■■□□□ 1.31
CDR1P51861 DUX4L1-201ENST00000627662 1275 ntBASIC23.24■■□□□ 1.31
CDR1P51861 DUX4L8-201ENST00000629013 1275 ntBASIC23.24■■□□□ 1.31
CDR1P51861 DUX4L3-201ENST00000630187 1275 ntBASIC23.24■■□□□ 1.31
CDR1P51861 DUX4L7-201ENST00000630678 1275 ntBASIC23.24■■□□□ 1.31
CDR1P51861 DUX4L5-201ENST00000630834 1275 ntBASIC23.24■■□□□ 1.31
CDR1P51861 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDR1P51861 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.24■■□□□ 1.31
CDR1P51861 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.24■■□□□ 1.31
CDR1P51861 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.24■■□□□ 1.31
CDR1P51861 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDR1P51861 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDR1P51861 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDR1P51861 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CDR1P51861 YBX1P1-201ENST00000445822 960 ntBASIC23.23■■□□□ 1.31
CDR1P51861 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.23■■□□□ 1.31
CDR1P51861 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.23■■□□□ 1.31
CDR1P51861 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.23■■□□□ 1.31
CDR1P51861 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CDR1P51861 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
CDR1P51861 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CDR1P51861 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CDR1P51861 C1orf229-201ENST00000623686 2258 ntBASIC23.22■■□□□ 1.31
CDR1P51861 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDR1P51861 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDR1P51861 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.22■■□□□ 1.31
CDR1P51861 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.22■■□□□ 1.31
CDR1P51861 AL358852.1-201ENST00000623174 1268 ntBASIC23.22■■□□□ 1.31
CDR1P51861 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.22■■□□□ 1.31
CDR1P51861 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDR1P51861 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDR1P51861 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDR1P51861 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.22■■□□□ 1.31
CDR1P51861 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDR1P51861 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDR1P51861 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.21■■□□□ 1.31
CDR1P51861 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDR1P51861 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDR1P51861 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms