Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CDK7P50613 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.77■■□□□ 1.4
CDK7P50613 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK7P50613 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CDK7P50613 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK7P50613 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.77■■□□□ 1.4
CDK7P50613 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.77■■□□□ 1.4
CDK7P50613 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.77■■□□□ 1.4
CDK7P50613 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CDK7P50613 OR10C1-204ENST00000622521 1039 ntBASIC23.77■■□□□ 1.4
CDK7P50613 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.77■■□□□ 1.4
CDK7P50613 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.77■■□□□ 1.4
CDK7P50613 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.77■■□□□ 1.4
CDK7P50613 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK7P50613 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
CDK7P50613 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
CDK7P50613 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK7P50613 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK7P50613 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDK7P50613 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.76■■□□□ 1.39
CDK7P50613 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CDK7P50613 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.76■■□□□ 1.39
CDK7P50613 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.76■■□□□ 1.39
CDK7P50613 AL512625.2-201ENST00000417533 625 ntBASIC23.76■■□□□ 1.39
CDK7P50613 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.76■■□□□ 1.39
CDK7P50613 EEF1DP3-203ENST00000566025 782 ntBASIC23.76■■□□□ 1.39
CDK7P50613 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.76■■□□□ 1.39
CDK7P50613 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CDK7P50613 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CDK7P50613 AP004607.7-201ENST00000527152 1677 ntBASIC23.76■■□□□ 1.39
CDK7P50613 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.76■■□□□ 1.39
CDK7P50613 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDK7P50613 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDK7P50613 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.75■■□□□ 1.39
CDK7P50613 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK7P50613 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.75■■□□□ 1.39
CDK7P50613 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
CDK7P50613 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.75■■□□□ 1.39
CDK7P50613 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
CDK7P50613 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.75■■□□□ 1.39
CDK7P50613 AC092118.2-201ENST00000613495 667 ntBASIC23.75■■□□□ 1.39
CDK7P50613 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.75■■□□□ 1.39
CDK7P50613 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CDK7P50613 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.75■■□□□ 1.39
CDK7P50613 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CDK7P50613 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK7P50613 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.75■■□□□ 1.39
CDK7P50613 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
CDK7P50613 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK7P50613 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDK7P50613 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDK7P50613 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDK7P50613 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.74■■□□□ 1.39
CDK7P50613 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
CDK7P50613 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDK7P50613 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.74■■□□□ 1.39
CDK7P50613 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDK7P50613 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.74■■□□□ 1.39
CDK7P50613 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.74■■□□□ 1.39
CDK7P50613 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.74■■□□□ 1.39
CDK7P50613 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDK7P50613 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDK7P50613 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.74■■□□□ 1.39
CDK7P50613 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.74■■□□□ 1.39
CDK7P50613 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CDK7P50613 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK7P50613 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK7P50613 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDK7P50613 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.73■■□□□ 1.39
CDK7P50613 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDK7P50613 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.73■■□□□ 1.39
CDK7P50613 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.73■■□□□ 1.39
CDK7P50613 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK7P50613 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDK7P50613 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
CDK7P50613 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK7P50613 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.72■■□□□ 1.39
CDK7P50613 AC093787.1-201ENST00000450396 207 ntBASIC23.72■■□□□ 1.39
CDK7P50613 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDK7P50613 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.72■■□□□ 1.39
CDK7P50613 AC053503.5-201ENST00000601508 636 ntBASIC23.72■■□□□ 1.39
CDK7P50613 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.72■■□□□ 1.39
CDK7P50613 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK7P50613 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK7P50613 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.72■■□□□ 1.39
CDK7P50613 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK7P50613 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
CDK7P50613 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.72■■□□□ 1.39
CDK7P50613 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CDK7P50613 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK7P50613 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDK7P50613 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDK7P50613 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDK7P50613 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDK7P50613 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CDK7P50613 RPS2P52-201ENST00000469610 820 ntBASIC23.71■■□□□ 1.39
CDK7P50613 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
CDK7P50613 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDK7P50613 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CDK7P50613 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms