Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC01960-201ENST00000563759 1884 ntBASIC26.66■■□□□ 1.86
PDE6BP35913 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDE6BP35913 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.65■■□□□ 1.86
PDE6BP35913 AC097658.1-201ENST00000475555 843 ntBASIC26.65■■□□□ 1.86
PDE6BP35913 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.65■■□□□ 1.86
PDE6BP35913 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.65■■□□□ 1.86
PDE6BP35913 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.65■■□□□ 1.86
PDE6BP35913 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.65■■□□□ 1.86
PDE6BP35913 MYC-209ENST00000641252 345 ntBASIC26.65■■□□□ 1.86
PDE6BP35913 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
PDE6BP35913 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDE6BP35913 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.65■■□□□ 1.86
PDE6BP35913 OR7E47P-201ENST00000546390 1422 ntBASIC26.65■■□□□ 1.86
PDE6BP35913 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
PDE6BP35913 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.64■■□□□ 1.86
PDE6BP35913 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.64■■□□□ 1.86
PDE6BP35913 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
PDE6BP35913 ESRRAP1-201ENST00000400596 1257 ntBASIC26.64■■□□□ 1.86
PDE6BP35913 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PDE6BP35913 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.64■■□□□ 1.85
PDE6BP35913 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
PDE6BP35913 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PDE6BP35913 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PDE6BP35913 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.63■■□□□ 1.85
PDE6BP35913 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
PDE6BP35913 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDE6BP35913 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDE6BP35913 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
PDE6BP35913 GCSHP5-201ENST00000443090 522 ntBASIC26.63■■□□□ 1.85
PDE6BP35913 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.63■■□□□ 1.85
PDE6BP35913 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.63■■□□□ 1.85
PDE6BP35913 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.63■■□□□ 1.85
PDE6BP35913 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
PDE6BP35913 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.63■■□□□ 1.85
PDE6BP35913 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDE6BP35913 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDE6BP35913 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDE6BP35913 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.63■■□□□ 1.85
PDE6BP35913 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDE6BP35913 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PDE6BP35913 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDE6BP35913 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDE6BP35913 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
PDE6BP35913 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDE6BP35913 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDE6BP35913 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.62■■□□□ 1.85
PDE6BP35913 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.62■■□□□ 1.85
PDE6BP35913 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.62■■□□□ 1.85
PDE6BP35913 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDE6BP35913 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDE6BP35913 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDE6BP35913 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PDE6BP35913 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.61■■□□□ 1.85
PDE6BP35913 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDE6BP35913 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.61■■□□□ 1.85
PDE6BP35913 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.61■■□□□ 1.85
PDE6BP35913 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.61■■□□□ 1.85
PDE6BP35913 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.61■■□□□ 1.85
PDE6BP35913 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PDE6BP35913 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDE6BP35913 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDE6BP35913 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.6■■□□□ 1.85
PDE6BP35913 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDE6BP35913 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.6■■□□□ 1.85
PDE6BP35913 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDE6BP35913 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDE6BP35913 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.6■■□□□ 1.85
PDE6BP35913 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDE6BP35913 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.6■■□□□ 1.85
PDE6BP35913 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDE6BP35913 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.6■■□□□ 1.85
PDE6BP35913 AC120498.10-201ENST00000621827 505 ntBASIC26.6■■□□□ 1.85
PDE6BP35913 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.6■■□□□ 1.85
PDE6BP35913 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
PDE6BP35913 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
PDE6BP35913 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
PDE6BP35913 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
PDE6BP35913 AP006587.3-201ENST00000525742 1516 ntBASIC26.59■■□□□ 1.85
PDE6BP35913 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PDE6BP35913 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
PDE6BP35913 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDE6BP35913 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDE6BP35913 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDE6BP35913 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDE6BP35913 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.58■■□□□ 1.85
PDE6BP35913 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.58■■□□□ 1.85
PDE6BP35913 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.58■■□□□ 1.85
PDE6BP35913 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.58■■□□□ 1.85
PDE6BP35913 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PDE6BP35913 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDE6BP35913 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDE6BP35913 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PDE6BP35913 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
PDE6BP35913 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PDE6BP35913 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.57■■□□□ 1.84
PDE6BP35913 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PDE6BP35913 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDE6BP35913 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
PDE6BP35913 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.56■■□□□ 1.84
PDE6BP35913 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms