Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TNFRSF1BP20333 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 AL157384.1-201ENST00000445995 2473 ntBASIC19.85■□□□□ 0.77
TNFRSF1BP20333 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 AC010525.1-201ENST00000585559 441 ntBASIC19.85■□□□□ 0.77
TNFRSF1BP20333 AL035685.1-201ENST00000636663 812 ntBASIC19.85■□□□□ 0.77
TNFRSF1BP20333 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1BP20333 AC073130.3-201ENST00000624389 2278 ntBASIC19.85■□□□□ 0.77
TNFRSF1BP20333 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 AL356740.2-201ENST00000601559 647 ntBASIC19.84■□□□□ 0.77
TNFRSF1BP20333 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFRSF1BP20333 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF1BP20333 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF1BP20333 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.82■□□□□ 0.76
TNFRSF1BP20333 MIR3621-201ENST00000580529 85 ntBASIC19.82■□□□□ 0.76
TNFRSF1BP20333 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
TNFRSF1BP20333 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 GUSBP5-201ENST00000418136 578 ntBASIC19.81■□□□□ 0.76
TNFRSF1BP20333 OR2I1P-207ENST00000453522 948 ntBASIC19.81■□□□□ 0.76
TNFRSF1BP20333 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1BP20333 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms