Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.36■□□□□ 0.69
CD53P19397 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.36■□□□□ 0.69
CD53P19397 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD53P19397 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CD53P19397 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.35■□□□□ 0.69
CD53P19397 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.35■□□□□ 0.69
CD53P19397 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.35■□□□□ 0.69
CD53P19397 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.35■□□□□ 0.69
CD53P19397 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.35■□□□□ 0.69
CD53P19397 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD53P19397 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.34■□□□□ 0.69
CD53P19397 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD53P19397 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD53P19397 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD53P19397 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD53P19397 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.34■□□□□ 0.69
CD53P19397 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CD53P19397 KRT18P5-201ENST00000436075 1291 ntBASIC19.34■□□□□ 0.69
CD53P19397 YBX1P1-201ENST00000445822 960 ntBASIC19.34■□□□□ 0.69
CD53P19397 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.34■□□□□ 0.69
CD53P19397 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD53P19397 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD53P19397 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD53P19397 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CD53P19397 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.34■□□□□ 0.69
CD53P19397 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.34■□□□□ 0.69
CD53P19397 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CD53P19397 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.33■□□□□ 0.69
CD53P19397 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CD53P19397 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.33■□□□□ 0.69
CD53P19397 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CD53P19397 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.33■□□□□ 0.69
CD53P19397 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
CD53P19397 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD53P19397 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.33■□□□□ 0.68
CD53P19397 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.33■□□□□ 0.68
CD53P19397 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.33■□□□□ 0.68
CD53P19397 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.33■□□□□ 0.68
CD53P19397 AL137784.2-201ENST00000607332 1000 ntBASIC19.33■□□□□ 0.68
CD53P19397 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD53P19397 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD53P19397 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 FP325331.1-202ENST00000623531 1380 ntBASIC19.32■□□□□ 0.68
CD53P19397 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.32■□□□□ 0.68
CD53P19397 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 AC126544.1-201ENST00000580842 1059 ntBASIC19.32■□□□□ 0.68
CD53P19397 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.32■□□□□ 0.68
CD53P19397 AL031602.1-201ENST00000633169 911 ntBASIC19.32■□□□□ 0.68
CD53P19397 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CD53P19397 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD53P19397 LINC01529-204ENST00000636474 1715 ntBASIC19.31■□□□□ 0.68
CD53P19397 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CD53P19397 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.31■□□□□ 0.68
CD53P19397 LINC01960-201ENST00000563759 1884 ntBASIC19.31■□□□□ 0.68
CD53P19397 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.31■□□□□ 0.68
CD53P19397 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CD53P19397 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.31■□□□□ 0.68
CD53P19397 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.31■□□□□ 0.68
CD53P19397 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CD53P19397 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD53P19397 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CD53P19397 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD53P19397 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD53P19397 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.3■□□□□ 0.68
CD53P19397 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CD53P19397 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD53P19397 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD53P19397 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
CD53P19397 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CD53P19397 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms