Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NELFEP18615 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.04■□□□□ 0.96
NELFEP18615 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.04■□□□□ 0.96
NELFEP18615 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.04■□□□□ 0.96
NELFEP18615 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NELFEP18615 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.04■□□□□ 0.96
NELFEP18615 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.04■□□□□ 0.96
NELFEP18615 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.04■□□□□ 0.96
NELFEP18615 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NELFEP18615 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.04■□□□□ 0.96
NELFEP18615 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NELFEP18615 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NELFEP18615 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NELFEP18615 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NELFEP18615 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.03■□□□□ 0.96
NELFEP18615 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.03■□□□□ 0.96
NELFEP18615 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.03■□□□□ 0.96
NELFEP18615 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NELFEP18615 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
NELFEP18615 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NELFEP18615 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.03■□□□□ 0.96
NELFEP18615 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NELFEP18615 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NELFEP18615 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
NELFEP18615 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.03■□□□□ 0.96
NELFEP18615 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.03■□□□□ 0.96
NELFEP18615 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NELFEP18615 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.03■□□□□ 0.96
NELFEP18615 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.02■□□□□ 0.96
NELFEP18615 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NELFEP18615 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NELFEP18615 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.02■□□□□ 0.96
NELFEP18615 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NELFEP18615 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.02■□□□□ 0.96
NELFEP18615 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.02■□□□□ 0.96
NELFEP18615 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NELFEP18615 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.02■□□□□ 0.96
NELFEP18615 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NELFEP18615 DUX4L2-201ENST00000561772 1275 ntBASIC21.02■□□□□ 0.96
NELFEP18615 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
NELFEP18615 DUX4L6-201ENST00000626483 1275 ntBASIC21.02■□□□□ 0.96
NELFEP18615 DUX4L1-201ENST00000627662 1275 ntBASIC21.02■□□□□ 0.96
NELFEP18615 DUX4L8-201ENST00000629013 1275 ntBASIC21.02■□□□□ 0.96
NELFEP18615 DUX4L3-201ENST00000630187 1275 ntBASIC21.02■□□□□ 0.96
NELFEP18615 DUX4L7-201ENST00000630678 1275 ntBASIC21.02■□□□□ 0.96
NELFEP18615 DUX4L5-201ENST00000630834 1275 ntBASIC21.02■□□□□ 0.96
NELFEP18615 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NELFEP18615 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.02■□□□□ 0.96
NELFEP18615 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NELFEP18615 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NELFEP18615 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NELFEP18615 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.01■□□□□ 0.95
NELFEP18615 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NELFEP18615 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NELFEP18615 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.01■□□□□ 0.95
NELFEP18615 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.01■□□□□ 0.95
NELFEP18615 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.01■□□□□ 0.95
NELFEP18615 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.01■□□□□ 0.95
NELFEP18615 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NELFEP18615 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.01■□□□□ 0.95
NELFEP18615 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NELFEP18615 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NELFEP18615 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
NELFEP18615 LINC02228-203ENST00000641970 1355 ntBASIC21■□□□□ 0.95
NELFEP18615 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21■□□□□ 0.95
NELFEP18615 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21■□□□□ 0.95
NELFEP18615 NT5C3AP1-201ENST00000394500 1012 ntBASIC21■□□□□ 0.95
NELFEP18615 CCDC92B-201ENST00000575506 885 ntBASIC21■□□□□ 0.95
NELFEP18615 AC087239.1-201ENST00000622671 572 ntBASIC21■□□□□ 0.95
NELFEP18615 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21■□□□□ 0.95
NELFEP18615 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21■□□□□ 0.95
NELFEP18615 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21■□□□□ 0.95
NELFEP18615 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NELFEP18615 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21■□□□□ 0.95
NELFEP18615 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NELFEP18615 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.99■□□□□ 0.95
NELFEP18615 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.99■□□□□ 0.95
NELFEP18615 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.99■□□□□ 0.95
NELFEP18615 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.99■□□□□ 0.95
NELFEP18615 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.99■□□□□ 0.95
NELFEP18615 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NELFEP18615 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms