Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 RHOT2-218ENST00000568636 3098 ntTSL 220.92■□□□□ 0.945e-10■■□□□ 12
XRCC6P12956 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.927e-6■■□□□ 12
XRCC6P12956 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.18■□□□□ 0.57e-6■■□□□ 12
XRCC6P12956 RHOT2-220ENST00000569197 530 ntTSL 513.21□□□□□ -0.295e-10■■□□□ 12
XRCC6P12956 UBAC1-205ENST00000486258 243 ntTSL 310.27□□□□□ -0.777e-6■■□□□ 12
XRCC6P12956 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.58□□□□□ -1.525e-6■■□□□ 12
XRCC6P12956 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.5□□□□□ -1.535e-6■■□□□ 12
XRCC6P12956 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.885e-6■■□□□ 12
XRCC6P12956 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.1■■■□□ 2.099e-18■■□□□ 12
XRCC6P12956 RPS20-203ENST00000519369 824 ntTSL 215□□□□□ -0.019e-18■■□□□ 12
XRCC6P12956 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.149e-18■■□□□ 12
XRCC6P12956 RPS20-209ENST00000521289 737 ntTSL 512.2□□□□□ -0.469e-18■■□□□ 12
XRCC6P12956 RPS20-212ENST00000618656 627 ntTSL 3 BASIC10.65□□□□□ -0.79e-18■■□□□ 12
XRCC6P12956 RPS20-207ENST00000520627 423 ntTSL 5 BASIC10.4□□□□□ -0.749e-18■■□□□ 12
XRCC6P12956 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.899e-18■■□□□ 12
XRCC6P12956 RPS20-204ENST00000519606 424 ntTSL 3 BASIC9.51□□□□□ -0.899e-18■■□□□ 12
XRCC6P12956 RPS20-206ENST00000520490 402 ntTSL 39.06□□□□□ -0.969e-18■■□□□ 12
XRCC6P12956 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.55□□□□□ -1.049e-18■■□□□ 12
XRCC6P12956 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.05□□□□□ -1.129e-18■■□□□ 12
XRCC6P12956 TMC6-209ENST00000588087 2384 ntTSL 226.66■■□□□ 1.868e-7■■□□□ 12
XRCC6P12956 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.87■■□□□ 1.738e-7■■□□□ 12
XRCC6P12956 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.051e-6■■□□□ 12
XRCC6P12956 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.071e-6■■□□□ 12
XRCC6P12956 OGT-210ENST00000488174 7243 ntTSL 57.52□□□□□ -1.21e-6■■□□□ 12
XRCC6P12956 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.37■■■□□ 2.292e-6■■□□□ 12
XRCC6P12956 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.53■■■□□ 22e-6■■□□□ 12
XRCC6P12956 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.982e-6■■□□□ 12
XRCC6P12956 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.832e-6■■□□□ 12
XRCC6P12956 DAZAP1-204ENST00000586579 619 ntTSL 325.28■■□□□ 1.642e-6■■□□□ 12
XRCC6P12956 DAZAP1-210ENST00000592453 1021 ntTSL 517.05■□□□□ 0.322e-6■■□□□ 12
XRCC6P12956 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.68■□□□□ 0.589e-12■■□□□ 12
XRCC6P12956 SNHG5-203ENST00000420199 1002 ntTSL 316.91■□□□□ 0.39e-12■■□□□ 12
XRCC6P12956 SNHG5-215ENST00000623163 851 ntTSL 515.99■□□□□ 0.159e-12■■□□□ 12
XRCC6P12956 SNHG5-209ENST00000435947 696 ntTSL 215.46■□□□□ 0.079e-12■■□□□ 12
XRCC6P12956 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC14.35□□□□□ -0.119e-12■■□□□ 12
XRCC6P12956 SNHG5-210ENST00000453754 401 ntTSL 313.49□□□□□ -0.259e-12■■□□□ 12
XRCC6P12956 SNHG5-206ENST00000428833 641 ntTSL 213.43□□□□□ -0.269e-12■■□□□ 12
XRCC6P12956 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC13.21□□□□□ -0.299e-12■■□□□ 12
XRCC6P12956 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC12.76□□□□□ -0.379e-12■■□□□ 12
XRCC6P12956 SNHG5-207ENST00000431043 998 ntTSL 212.76□□□□□ -0.379e-12■■□□□ 12
XRCC6P12956 SNHG5-202ENST00000414002 430 ntTSL 210.87□□□□□ -0.679e-12■■□□□ 12
XRCC6P12956 SNHG5-220ENST00000624128 672 ntTSL 29.94□□□□□ -0.829e-12■■□□□ 12
XRCC6P12956 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC9.3□□□□□ -0.929e-12■■□□□ 12
XRCC6P12956 SNHG5-217ENST00000623650 886 ntTSL 58.99□□□□□ -0.979e-12■■□□□ 12
XRCC6P12956 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.23□□□□□ -1.259e-12■■□□□ 12
XRCC6P12956 SNHG5-204ENST00000425170 489 ntTSL 26.79□□□□□ -1.329e-12■■□□□ 12
XRCC6P12956 SNHG5-216ENST00000623267 374 ntTSL 56.62□□□□□ -1.359e-12■■□□□ 12
XRCC6P12956 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.62□□□□□ -1.359e-12■■□□□ 12
XRCC6P12956 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.26□□□□□ -1.419e-12■■□□□ 12
XRCC6P12956 SNHG5-205ENST00000427501 680 ntTSL 24.86□□□□□ -1.639e-12■■□□□ 12
XRCC6P12956 SNHG5-208ENST00000433843 388 ntTSL 22.21□□□□□ -2.069e-12■■□□□ 12
XRCC6P12956 CHTF18-217ENST00000567620 701 ntTSL 516.64■□□□□ 0.252e-7■■□□□ 12
XRCC6P12956 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.14e-9■■□□□ 11.9
XRCC6P12956 PAFAH1B1-211ENST00000576586 557 ntTSL 418.17■□□□□ 0.51e-9■■□□□ 11.9
XRCC6P12956 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.431e-9■■□□□ 11.9
XRCC6P12956 FLNA-217ENST00000498411 368 ntTSL 317.01■□□□□ 0.311e-9■■□□□ 11.9
XRCC6P12956 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.151e-9■■□□□ 11.9
XRCC6P12956 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.064e-7■■□□□ 11.9
XRCC6P12956 SRSF3-203ENST00000477442 1095 ntTSL 514.5□□□□□ -0.094e-7■■□□□ 11.9
XRCC6P12956 SRSF3-207ENST00000620389 2655 ntTSL 211.21□□□□□ -0.614e-7■■□□□ 11.9
XRCC6P12956 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.184e-7■■□□□ 11.9
XRCC6P12956 SRSF3-205ENST00000614136 2376 nt5.55□□□□□ -1.524e-7■■□□□ 11.9
XRCC6P12956 UBAP2-209ENST00000474372 1339 ntTSL 515.63■□□□□ 0.095e-18■■□□□ 11.9
XRCC6P12956 UBAP2-211ENST00000488443 492 ntTSL 514.64□□□□□ -0.075e-18■■□□□ 11.9
XRCC6P12956 UBAP2-205ENST00000379239 2513 ntTSL 2 BASIC13.69□□□□□ -0.225e-18■■□□□ 11.9
XRCC6P12956 SNORD121B-201ENST00000458838 81 ntBASIC4.24□□□□□ -1.735e-18■■□□□ 11.9
XRCC6P12956 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.148e-26■■□□□ 11.9
XRCC6P12956 ESYT2-202ENST00000275418 3251 ntAPPRIS ALT2 TSL 526.4■■□□□ 1.821e-11■■□□□ 11.9
XRCC6P12956 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.321e-11■■□□□ 11.9
XRCC6P12956 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.181e-11■■□□□ 11.9
XRCC6P12956 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.41□□□□□ -1.221e-7■■□□□ 11.9
XRCC6P12956 LINC00534-202ENST00000523283 772 ntTSL 27.41□□□□□ -1.221e-7■■□□□ 11.9
XRCC6P12956 LINC00534-204ENST00000524361 620 ntTSL 36.83□□□□□ -1.321e-7■■□□□ 11.9
XRCC6P12956 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.29□□□□□ -1.561e-7■■□□□ 11.9
XRCC6P12956 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.965e-6■■□□□ 11.9
XRCC6P12956 ZNF117-202ENST00000487644 1837 ntTSL 25.74□□□□□ -1.495e-6■■□□□ 11.9
XRCC6P12956 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.615e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-213ENST00000491719 800 ntTSL 522.78■■□□□ 1.245e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-207ENST00000468263 706 ntTSL 219.29■□□□□ 0.685e-7■■□□□ 11.9
XRCC6P12956 RAB11FIP3-204ENST00000449879 580 ntTSL 318.4■□□□□ 0.545e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-204ENST00000466809 588 ntTSL 518.26■□□□□ 0.515e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-203ENST00000465058 534 ntTSL 418.04■□□□□ 0.485e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-211ENST00000479504 559 ntTSL 418.04■□□□□ 0.485e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-210ENST00000476938 500 ntTSL 217.66■□□□□ 0.425e-7■■□□□ 11.9
XRCC6P12956 RAB11FIP3-206ENST00000452814 804 ntTSL 517.42■□□□□ 0.385e-7■■□□□ 11.9
XRCC6P12956 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC15.49■□□□□ 0.075e-7■■□□□ 11.9
XRCC6P12956 TMEM2-211ENST00000543165 542 ntTSL 215.25■□□□□ 0.035e-7■■□□□ 11.9
XRCC6P12956 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 514.95□□□□□ -0.025e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-202ENST00000421467 2988 ntTSL 512.94□□□□□ -0.345e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-208ENST00000469723 556 ntTSL 59.3□□□□□ -0.925e-7■■□□□ 11.9
XRCC6P12956 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.035e-7■■□□□ 11.9
XRCC6P12956 TMEM2-212ENST00000545719 533 ntTSL 45.1□□□□□ -1.595e-7■■□□□ 11.9
XRCC6P12956 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.03■■□□□ 1.283e-7■■□□□ 11.9
XRCC6P12956 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.323e-7■■□□□ 11.9
XRCC6P12956 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.113e-7■■□□□ 11.9
XRCC6P12956 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC15.61■□□□□ 0.095e-7■■□□□ 11.8
XRCC6P12956 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC13.03□□□□□ -0.325e-7■■□□□ 11.8
XRCC6P12956 HERC2P3-205ENST00000428453 4383 ntTSL 212.34□□□□□ -0.435e-7■■□□□ 11.8
XRCC6P12956 HERC2P3-209ENST00000437318 4161 ntTSL 1 (best)9.96□□□□□ -0.815e-7■■□□□ 11.8
XRCC6P12956 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.724e-7■■□□□ 11.8
Retrieved 100 of 6,788 protein–RNA pairs in 45.4 ms