Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.3■□□□□ 0.84
TPRP12270 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.3■□□□□ 0.84
TPRP12270 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.3■□□□□ 0.84
TPRP12270 AC233263.1-201ENST00000578059 224 ntBASIC20.3■□□□□ 0.84
TPRP12270 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPRP12270 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.3■□□□□ 0.84
TPRP12270 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.3■□□□□ 0.84
TPRP12270 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPRP12270 AL135905.2-201ENST00000584934 1404 ntBASIC20.3■□□□□ 0.84
TPRP12270 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.3■□□□□ 0.84
TPRP12270 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPRP12270 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.3■□□□□ 0.84
TPRP12270 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.3■□□□□ 0.84
TPRP12270 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TPRP12270 AP001412.1-201ENST00000608405 714 ntBASIC20.3■□□□□ 0.84
TPRP12270 AC069544.1-201ENST00000609399 999 ntBASIC20.3■□□□□ 0.84
TPRP12270 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPRP12270 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
TPRP12270 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TPRP12270 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.29■□□□□ 0.84
TPRP12270 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPRP12270 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.29■□□□□ 0.84
TPRP12270 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.29■□□□□ 0.84
TPRP12270 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.29■□□□□ 0.84
TPRP12270 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.29■□□□□ 0.84
TPRP12270 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.29■□□□□ 0.84
TPRP12270 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPRP12270 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TPRP12270 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TPRP12270 UPK3BP1-201ENST00000428678 509 ntBASIC20.29■□□□□ 0.84
TPRP12270 KRT18P20-201ENST00000548986 1279 ntBASIC20.29■□□□□ 0.84
TPRP12270 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPRP12270 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.28■□□□□ 0.84
TPRP12270 AC009237.3-201ENST00000393279 1427 ntBASIC20.28■□□□□ 0.84
TPRP12270 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPRP12270 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPRP12270 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.28■□□□□ 0.84
TPRP12270 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.28■□□□□ 0.84
TPRP12270 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TPRP12270 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TPRP12270 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TPRP12270 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.27■□□□□ 0.84
TPRP12270 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.27■□□□□ 0.84
TPRP12270 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.27■□□□□ 0.84
TPRP12270 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TPRP12270 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPRP12270 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.27■□□□□ 0.84
TPRP12270 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TPRP12270 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TPRP12270 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TPRP12270 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.27■□□□□ 0.83
TPRP12270 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.27■□□□□ 0.83
TPRP12270 AL162412.1-201ENST00000567129 965 ntBASIC20.27■□□□□ 0.83
TPRP12270 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
TPRP12270 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TPRP12270 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPRP12270 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPRP12270 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPRP12270 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPRP12270 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.26■□□□□ 0.83
TPRP12270 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPRP12270 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.26■□□□□ 0.83
TPRP12270 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.26■□□□□ 0.83
TPRP12270 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.26■□□□□ 0.83
TPRP12270 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.26■□□□□ 0.83
TPRP12270 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.26■□□□□ 0.83
TPRP12270 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.26■□□□□ 0.83
TPRP12270 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.26■□□□□ 0.83
TPRP12270 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TPRP12270 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TPRP12270 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPRP12270 RPS2P55-201ENST00000397318 883 ntBASIC20.26■□□□□ 0.83
TPRP12270 AC107956.1-201ENST00000494359 873 ntBASIC20.26■□□□□ 0.83
TPRP12270 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.26■□□□□ 0.83
TPRP12270 AC138907.5-202ENST00000569484 235 ntBASIC20.26■□□□□ 0.83
TPRP12270 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPRP12270 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TPRP12270 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.25■□□□□ 0.83
TPRP12270 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.25■□□□□ 0.83
TPRP12270 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.25■□□□□ 0.83
TPRP12270 AC010501.1-201ENST00000606270 1962 ntBASIC20.25■□□□□ 0.83
TPRP12270 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.24■□□□□ 0.83
TPRP12270 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.24■□□□□ 0.83
TPRP12270 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TPRP12270 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPRP12270 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPRP12270 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPRP12270 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPRP12270 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.24■□□□□ 0.83
TPRP12270 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPRP12270 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.24■□□□□ 0.83
TPRP12270 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPRP12270 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.23■□□□□ 0.83
TPRP12270 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.23■□□□□ 0.83
TPRP12270 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPRP12270 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPRP12270 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.23■□□□□ 0.83
TPRP12270 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
TPRP12270 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPRP12270 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms