Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 AC096631.2-201ENST00000436136 790 ntBASIC18.17■□□□□ 0.5
ZNF728P0DKX0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 AL136162.1-201ENST00000607711 1078 ntBASIC18.16■□□□□ 0.5
ZNF728P0DKX0 AC136469.2-201ENST00000623944 1028 ntBASIC18.16■□□□□ 0.5
ZNF728P0DKX0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF728P0DKX0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 AC135279.3-201ENST00000610945 1311 ntBASIC18.15■□□□□ 0.5
ZNF728P0DKX0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF728P0DKX0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF728P0DKX0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
ZNF728P0DKX0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF728P0DKX0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF728P0DKX0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 AC024257.2-201ENST00000549699 147 ntBASIC18.13■□□□□ 0.49
ZNF728P0DKX0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 AC244015.2-201ENST00000616358 1861 ntBASIC18.13■□□□□ 0.49
ZNF728P0DKX0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF728P0DKX0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 PBX2P1-201ENST00000493219 1291 ntBASIC18.12■□□□□ 0.49
ZNF728P0DKX0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 AC005229.4-201ENST00000610085 2198 ntBASIC18.12■□□□□ 0.49
ZNF728P0DKX0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF728P0DKX0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF728P0DKX0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms