Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNYL3P0C7X3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 KRT19P1-201ENST00000405746 1186 ntBASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCNYL3P0C7X3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 ID1-201ENST00000376105 1233 ntBASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCNYL3P0C7X3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCNYL3P0C7X3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.58■□□□□ 0.88
CCNYL3P0C7X3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CCNYL3P0C7X3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNYL3P0C7X3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.58■□□□□ 0.88
CCNYL3P0C7X3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNYL3P0C7X3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 AP004607.4-201ENST00000530158 1459 ntBASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 AC080038.1-201ENST00000611274 1154 ntBASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.57■□□□□ 0.88
CCNYL3P0C7X3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNYL3P0C7X3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 AC004854.2-201ENST00000608450 1441 ntBASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 AC006015.1-201ENST00000429970 570 ntBASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 GUSBP5-202ENST00000510805 1989 ntBASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNYL3P0C7X3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 AC079140.4-201ENST00000507448 529 ntBASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.54■□□□□ 0.88
CCNYL3P0C7X3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms