Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 AP004607.7-201ENST00000527152 1677 ntBASIC20.19■□□□□ 0.82
RAB40ALP0C0E4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 CROCCP5-201ENST00000436658 830 ntBASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB40ALP0C0E4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 MFSD11-216ENST00000590393 1141 ntBASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 AP001160.3-201ENST00000601484 763 ntBASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 CLDN5-201ENST00000403084 2357 ntBASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40ALP0C0E4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB40ALP0C0E4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 AC231657.2-201ENST00000624556 255 ntBASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAB40ALP0C0E4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 NCF1B-203ENST00000435988 1254 ntBASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 AL117328.2-201ENST00000624617 1940 ntBASIC20.14■□□□□ 0.81
RAB40ALP0C0E4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 KRT18P20-201ENST00000548986 1279 ntBASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 AC138907.5-202ENST00000569484 235 ntBASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 UBE2DNL-204ENST00000602536 740 ntBASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 AC104771.1-201ENST00000603335 964 ntBASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 LINC00526-201ENST00000581067 1875 ntBASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40ALP0C0E4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms