Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.35■■□□□ 1.49
HOXC6P09630 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
HOXC6P09630 AL034346.1-201ENST00000568244 1277 ntBASIC24.35■■□□□ 1.49
HOXC6P09630 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HOXC6P09630 ITM2C-210ENST00000620962 501 ntBASIC24.35■■□□□ 1.49
HOXC6P09630 OR10C1-204ENST00000622521 1039 ntBASIC24.35■■□□□ 1.49
HOXC6P09630 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HOXC6P09630 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HOXC6P09630 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HOXC6P09630 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HOXC6P09630 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HOXC6P09630 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.34■■□□□ 1.49
HOXC6P09630 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HOXC6P09630 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.34■■□□□ 1.49
HOXC6P09630 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.34■■□□□ 1.49
HOXC6P09630 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
HOXC6P09630 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
HOXC6P09630 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
HOXC6P09630 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
HOXC6P09630 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
HOXC6P09630 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HOXC6P09630 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.33■■□□□ 1.49
HOXC6P09630 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
HOXC6P09630 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HOXC6P09630 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.33■■□□□ 1.49
HOXC6P09630 AL512625.2-201ENST00000417533 625 ntBASIC24.33■■□□□ 1.49
HOXC6P09630 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.33■■□□□ 1.49
HOXC6P09630 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
HOXC6P09630 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
HOXC6P09630 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HOXC6P09630 MKRN4P-201ENST00000444706 1521 ntBASIC24.33■■□□□ 1.49
HOXC6P09630 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HOXC6P09630 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HOXC6P09630 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
HOXC6P09630 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
HOXC6P09630 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.33■■□□□ 1.48
HOXC6P09630 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
HOXC6P09630 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
HOXC6P09630 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HOXC6P09630 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HOXC6P09630 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.32■■□□□ 1.48
HOXC6P09630 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.32■■□□□ 1.48
HOXC6P09630 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.32■■□□□ 1.48
HOXC6P09630 AC092118.2-201ENST00000613495 667 ntBASIC24.32■■□□□ 1.48
HOXC6P09630 OR7E47P-201ENST00000546390 1422 ntBASIC24.32■■□□□ 1.48
HOXC6P09630 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HOXC6P09630 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.31■■□□□ 1.48
HOXC6P09630 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
HOXC6P09630 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.31■■□□□ 1.48
HOXC6P09630 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HOXC6P09630 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.31■■□□□ 1.48
HOXC6P09630 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HOXC6P09630 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HOXC6P09630 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HOXC6P09630 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HOXC6P09630 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HOXC6P09630 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.31■■□□□ 1.48
HOXC6P09630 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.31■■□□□ 1.48
HOXC6P09630 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HOXC6P09630 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
HOXC6P09630 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
HOXC6P09630 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.3■■□□□ 1.48
HOXC6P09630 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HOXC6P09630 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.3■■□□□ 1.48
HOXC6P09630 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.3■■□□□ 1.48
HOXC6P09630 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HOXC6P09630 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.3■■□□□ 1.48
HOXC6P09630 AC093827.2-201ENST00000512654 315 ntBASIC24.3■■□□□ 1.48
HOXC6P09630 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
HOXC6P09630 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
HOXC6P09630 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.3■■□□□ 1.48
HOXC6P09630 LINC00526-201ENST00000581067 1875 ntBASIC24.3■■□□□ 1.48
HOXC6P09630 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HOXC6P09630 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.3■■□□□ 1.48
HOXC6P09630 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HOXC6P09630 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
HOXC6P09630 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HOXC6P09630 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HOXC6P09630 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HOXC6P09630 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.29■■□□□ 1.48
HOXC6P09630 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HOXC6P09630 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.29■■□□□ 1.48
HOXC6P09630 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
HOXC6P09630 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.29■■□□□ 1.48
HOXC6P09630 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.29■■□□□ 1.48
HOXC6P09630 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
HOXC6P09630 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.29■■□□□ 1.48
HOXC6P09630 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
HOXC6P09630 AP006587.3-201ENST00000525742 1516 ntBASIC24.29■■□□□ 1.48
HOXC6P09630 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.29■■□□□ 1.48
HOXC6P09630 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HOXC6P09630 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.28■■□□□ 1.48
HOXC6P09630 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
HOXC6P09630 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
HOXC6P09630 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.28■■□□□ 1.48
HOXC6P09630 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.28■■□□□ 1.48
HOXC6P09630 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.28■■□□□ 1.48
HOXC6P09630 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.28■■□□□ 1.48
HOXC6P09630 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HOXC6P09630 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms