Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP2P08253 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP2P08253 AC055733.4-201ENST00000638462 1354 ntBASIC21.65■■□□□ 1.06
MMP2P08253 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP2P08253 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MMP2P08253 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP2P08253 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MMP2P08253 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.65■■□□□ 1.06
MMP2P08253 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.65■■□□□ 1.06
MMP2P08253 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
MMP2P08253 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP2P08253 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.65■■□□□ 1.06
MMP2P08253 AC005224.4-201ENST00000583262 1652 ntBASIC21.65■■□□□ 1.06
MMP2P08253 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.65■■□□□ 1.06
MMP2P08253 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
MMP2P08253 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP2P08253 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP2P08253 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MMP2P08253 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP2P08253 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP2P08253 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP2P08253 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP2P08253 AC027612.3-201ENST00000413684 1047 ntBASIC21.64■■□□□ 1.05
MMP2P08253 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
MMP2P08253 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP2P08253 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP2P08253 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP2P08253 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP2P08253 AC003102.1-202ENST00000563394 1796 ntBASIC21.64■■□□□ 1.05
MMP2P08253 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.63■■□□□ 1.05
MMP2P08253 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.63■■□□□ 1.05
MMP2P08253 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.63■■□□□ 1.05
MMP2P08253 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
MMP2P08253 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
MMP2P08253 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP2P08253 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.63■■□□□ 1.05
MMP2P08253 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP2P08253 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP2P08253 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP2P08253 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP2P08253 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP2P08253 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.62■■□□□ 1.05
MMP2P08253 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP2P08253 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP2P08253 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
MMP2P08253 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP2P08253 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP2P08253 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
MMP2P08253 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP2P08253 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.61■■□□□ 1.05
MMP2P08253 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP2P08253 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP2P08253 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP2P08253 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP2P08253 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
MMP2P08253 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
MMP2P08253 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP2P08253 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
MMP2P08253 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP2P08253 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP2P08253 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
MMP2P08253 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP2P08253 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP2P08253 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP2P08253 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP2P08253 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.6■■□□□ 1.05
MMP2P08253 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP2P08253 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP2P08253 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP2P08253 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.6■■□□□ 1.05
MMP2P08253 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP2P08253 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.59■■□□□ 1.05
MMP2P08253 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP2P08253 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP2P08253 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.59■■□□□ 1.05
MMP2P08253 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
MMP2P08253 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
MMP2P08253 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.59■■□□□ 1.05
MMP2P08253 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP2P08253 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
MMP2P08253 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP2P08253 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MMP2P08253 AC019069.1-201ENST00000610008 1333 ntBASIC21.58■■□□□ 1.05
MMP2P08253 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP2P08253 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP2P08253 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
MMP2P08253 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MMP2P08253 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms