Protein–RNA interactions for Protein: P06401

PGR, Progesterone receptor, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGRP06401 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PGRP06401 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PGRP06401 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.36■□□□□ 0.85
PGRP06401 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.36■□□□□ 0.85
PGRP06401 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PGRP06401 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.35■□□□□ 0.85
PGRP06401 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.35■□□□□ 0.85
PGRP06401 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
PGRP06401 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PGRP06401 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.35■□□□□ 0.85
PGRP06401 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.35■□□□□ 0.85
PGRP06401 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PGRP06401 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.34■□□□□ 0.85
PGRP06401 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PGRP06401 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.34■□□□□ 0.85
PGRP06401 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.34■□□□□ 0.85
PGRP06401 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.34■□□□□ 0.85
PGRP06401 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PGRP06401 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.34■□□□□ 0.85
PGRP06401 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PGRP06401 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PGRP06401 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PGRP06401 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PGRP06401 OXCT2P1-201ENST00000447263 1535 ntBASIC20.33■□□□□ 0.85
PGRP06401 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PGRP06401 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.33■□□□□ 0.85
PGRP06401 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PGRP06401 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.33■□□□□ 0.85
PGRP06401 AL512631.2-201ENST00000604634 923 ntBASIC20.33■□□□□ 0.85
PGRP06401 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.33■□□□□ 0.85
PGRP06401 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PGRP06401 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
PGRP06401 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PGRP06401 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PGRP06401 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGRP06401 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGRP06401 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PGRP06401 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGRP06401 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGRP06401 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.32■□□□□ 0.84
PGRP06401 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGRP06401 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.32■□□□□ 0.84
PGRP06401 AC010525.1-201ENST00000585559 441 ntBASIC20.32■□□□□ 0.84
PGRP06401 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PGRP06401 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGRP06401 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGRP06401 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.32■□□□□ 0.84
PGRP06401 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGRP06401 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PGRP06401 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGRP06401 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.31■□□□□ 0.84
PGRP06401 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGRP06401 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGRP06401 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.31■□□□□ 0.84
PGRP06401 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.31■□□□□ 0.84
PGRP06401 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PGRP06401 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PGRP06401 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PGRP06401 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PGRP06401 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.3■□□□□ 0.84
PGRP06401 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGRP06401 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PGRP06401 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
PGRP06401 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.3■□□□□ 0.84
PGRP06401 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.29■□□□□ 0.84
PGRP06401 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PGRP06401 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGRP06401 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PGRP06401 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.29■□□□□ 0.84
PGRP06401 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGRP06401 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms