Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPLP0P05388 AC005224.4-201ENST00000583262 1652 ntBASIC20.92■□□□□ 0.94
RPLP0P05388 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPLP0P05388 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPLP0P05388 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
RPLP0P05388 AC006970.2-201ENST00000450065 779 ntBASIC20.91■□□□□ 0.94
RPLP0P05388 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.91■□□□□ 0.94
RPLP0P05388 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
RPLP0P05388 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.91■□□□□ 0.94
RPLP0P05388 AC011767.1-201ENST00000617410 1153 ntBASIC20.91■□□□□ 0.94
RPLP0P05388 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPLP0P05388 EP400NL-214ENST00000641289 2402 ntBASIC20.9■□□□□ 0.94
RPLP0P05388 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RPLP0P05388 AC009237.3-201ENST00000393279 1427 ntBASIC20.9■□□□□ 0.94
RPLP0P05388 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RPLP0P05388 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.9■□□□□ 0.94
RPLP0P05388 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.9■□□□□ 0.94
RPLP0P05388 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.9■□□□□ 0.94
RPLP0P05388 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RPLP0P05388 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.9■□□□□ 0.94
RPLP0P05388 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPLP0P05388 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPLP0P05388 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.89■□□□□ 0.94
RPLP0P05388 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPLP0P05388 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPLP0P05388 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPLP0P05388 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPLP0P05388 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.89■□□□□ 0.93
RPLP0P05388 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.89■□□□□ 0.93
RPLP0P05388 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPLP0P05388 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPLP0P05388 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPLP0P05388 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RPLP0P05388 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.89■□□□□ 0.93
RPLP0P05388 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.89■□□□□ 0.93
RPLP0P05388 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
RPLP0P05388 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RPLP0P05388 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPLP0P05388 KRT87P-202ENST00000534226 1464 ntBASIC20.88■□□□□ 0.93
RPLP0P05388 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RPLP0P05388 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPLP0P05388 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPLP0P05388 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPLP0P05388 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.88■□□□□ 0.93
RPLP0P05388 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPLP0P05388 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.88■□□□□ 0.93
RPLP0P05388 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPLP0P05388 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.88■□□□□ 0.93
RPLP0P05388 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.88■□□□□ 0.93
RPLP0P05388 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RPLP0P05388 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.88■□□□□ 0.93
RPLP0P05388 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.88■□□□□ 0.93
RPLP0P05388 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPLP0P05388 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPLP0P05388 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPLP0P05388 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.87■□□□□ 0.93
RPLP0P05388 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 CROCCP5-201ENST00000436658 830 ntBASIC20.87■□□□□ 0.93
RPLP0P05388 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.87■□□□□ 0.93
RPLP0P05388 AC104187.1-201ENST00000607510 612 ntBASIC20.87■□□□□ 0.93
RPLP0P05388 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RPLP0P05388 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RPLP0P05388 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPLP0P05388 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPLP0P05388 AC092068.2-201ENST00000590491 1708 ntBASIC20.87■□□□□ 0.93
RPLP0P05388 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPLP0P05388 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPLP0P05388 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.86■□□□□ 0.93
RPLP0P05388 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPLP0P05388 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPLP0P05388 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPLP0P05388 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPLP0P05388 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.86■□□□□ 0.93
RPLP0P05388 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms