Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBC1P01850 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBC1P01850 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBC1P01850 EP400NL-214ENST00000641289 2402 ntBASIC21.48■■□□□ 1.03
TRBC1P01850 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRBC1P01850 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.48■■□□□ 1.03
TRBC1P01850 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
TRBC1P01850 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBC1P01850 KRT18P14-201ENST00000534205 1250 ntBASIC21.48■■□□□ 1.03
TRBC1P01850 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.48■■□□□ 1.03
TRBC1P01850 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 FAM99A-202ENST00000538190 1989 ntBASIC21.48■■□□□ 1.03
TRBC1P01850 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBC1P01850 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRBC1P01850 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRBC1P01850 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRBC1P01850 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBC1P01850 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBC1P01850 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRBC1P01850 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRBC1P01850 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.47■■□□□ 1.03
TRBC1P01850 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.47■■□□□ 1.03
TRBC1P01850 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBC1P01850 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBC1P01850 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.46■■□□□ 1.03
TRBC1P01850 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRBC1P01850 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBC1P01850 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRBC1P01850 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBC1P01850 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRBC1P01850 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.46■■□□□ 1.03
TRBC1P01850 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.46■■□□□ 1.03
TRBC1P01850 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBC1P01850 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRBC1P01850 DUX4L2-201ENST00000561772 1275 ntBASIC21.46■■□□□ 1.03
TRBC1P01850 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.46■■□□□ 1.03
TRBC1P01850 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.46■■□□□ 1.03
TRBC1P01850 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
TRBC1P01850 DUX4L6-201ENST00000626483 1275 ntBASIC21.46■■□□□ 1.03
TRBC1P01850 DUX4L1-201ENST00000627662 1275 ntBASIC21.46■■□□□ 1.03
TRBC1P01850 DUX4L8-201ENST00000629013 1275 ntBASIC21.46■■□□□ 1.03
TRBC1P01850 DUX4L3-201ENST00000630187 1275 ntBASIC21.46■■□□□ 1.03
TRBC1P01850 DUX4L7-201ENST00000630678 1275 ntBASIC21.46■■□□□ 1.03
TRBC1P01850 DUX4L5-201ENST00000630834 1275 ntBASIC21.46■■□□□ 1.03
TRBC1P01850 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBC1P01850 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRBC1P01850 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRBC1P01850 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.46■■□□□ 1.03
TRBC1P01850 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.45■■□□□ 1.02
TRBC1P01850 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRBC1P01850 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TRBC1P01850 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRBC1P01850 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRBC1P01850 AC034268.1-201ENST00000441047 882 ntBASIC21.45■■□□□ 1.02
TRBC1P01850 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.45■■□□□ 1.02
TRBC1P01850 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.45■■□□□ 1.02
TRBC1P01850 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRBC1P01850 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRBC1P01850 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRBC1P01850 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRBC1P01850 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRBC1P01850 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRBC1P01850 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRBC1P01850 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRBC1P01850 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.44■■□□□ 1.02
TRBC1P01850 C11orf96-202ENST00000528572 1834 ntBASIC21.44■■□□□ 1.02
TRBC1P01850 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.44■■□□□ 1.02
TRBC1P01850 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRBC1P01850 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.44■■□□□ 1.02
TRBC1P01850 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.44■■□□□ 1.02
TRBC1P01850 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TRBC1P01850 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRBC1P01850 AC026471.6-201ENST00000622954 1905 ntBASIC21.44■■□□□ 1.02
TRBC1P01850 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRBC1P01850 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
TRBC1P01850 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRBC1P01850 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
TRBC1P01850 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.43■■□□□ 1.02
TRBC1P01850 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBC1P01850 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
TRBC1P01850 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBC1P01850 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.43■■□□□ 1.02
TRBC1P01850 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
TRBC1P01850 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.43■■□□□ 1.02
TRBC1P01850 MIR5787-201ENST00000611784 55 ntBASIC21.43■■□□□ 1.02
TRBC1P01850 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.43■■□□□ 1.02
TRBC1P01850 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRBC1P01850 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRBC1P01850 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.43■■□□□ 1.02
TRBC1P01850 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRBC1P01850 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRBC1P01850 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRBC1P01850 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms