Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SIX6O95475 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.89■□□□□ 0.45
SIX6O95475 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SIX6O95475 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SIX6O95475 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.89■□□□□ 0.45
SIX6O95475 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.89■□□□□ 0.45
SIX6O95475 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX6O95475 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX6O95475 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX6O95475 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.88■□□□□ 0.45
SIX6O95475 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
SIX6O95475 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SIX6O95475 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.88■□□□□ 0.45
SIX6O95475 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX6O95475 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX6O95475 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX6O95475 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 AC009831.1-201ENST00000580420 1582 ntBASIC17.87■□□□□ 0.45
SIX6O95475 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.87■□□□□ 0.45
SIX6O95475 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SIX6O95475 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SIX6O95475 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.87■□□□□ 0.45
SIX6O95475 AC087393.1-201ENST00000582896 145 ntBASIC17.87■□□□□ 0.45
SIX6O95475 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX6O95475 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SIX6O95475 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SIX6O95475 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SIX6O95475 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.87■□□□□ 0.45
SIX6O95475 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX6O95475 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SIX6O95475 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.86■□□□□ 0.45
SIX6O95475 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SIX6O95475 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 AC011551.1-201ENST00000614101 683 ntBASIC17.86■□□□□ 0.45
SIX6O95475 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SIX6O95475 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX6O95475 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX6O95475 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SIX6O95475 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX6O95475 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX6O95475 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.85■□□□□ 0.45
SIX6O95475 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.85■□□□□ 0.45
SIX6O95475 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX6O95475 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SIX6O95475 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.84■□□□□ 0.45
SIX6O95475 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.84■□□□□ 0.45
SIX6O95475 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SIX6O95475 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SIX6O95475 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SIX6O95475 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 RPS2P35-201ENST00000443417 897 ntBASIC17.84■□□□□ 0.45
SIX6O95475 AC018755.3-202ENST00000596210 929 ntBASIC17.84■□□□□ 0.45
SIX6O95475 AC133552.2-201ENST00000619106 1032 ntBASIC17.84■□□□□ 0.45
SIX6O95475 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SIX6O95475 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SIX6O95475 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms