Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.01■□□□□ 0.79
SNX4O95219 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX4O95219 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX4O95219 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX4O95219 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX4O95219 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20■□□□□ 0.79
SNX4O95219 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SNX4O95219 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20■□□□□ 0.79
SNX4O95219 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20■□□□□ 0.79
SNX4O95219 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20■□□□□ 0.79
SNX4O95219 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SNX4O95219 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX4O95219 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SNX4O95219 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX4O95219 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX4O95219 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX4O95219 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.99■□□□□ 0.79
SNX4O95219 AC010141.3-201ENST00000456659 717 ntBASIC19.99■□□□□ 0.79
SNX4O95219 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX4O95219 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX4O95219 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SNX4O95219 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX4O95219 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX4O95219 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SNX4O95219 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNX4O95219 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX4O95219 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX4O95219 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX4O95219 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX4O95219 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.98■□□□□ 0.79
SNX4O95219 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX4O95219 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX4O95219 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.98■□□□□ 0.79
SNX4O95219 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.98■□□□□ 0.79
SNX4O95219 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX4O95219 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
SNX4O95219 AL358852.1-201ENST00000623174 1268 ntBASIC19.98■□□□□ 0.79
SNX4O95219 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX4O95219 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX4O95219 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX4O95219 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX4O95219 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX4O95219 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.98■□□□□ 0.79
SNX4O95219 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX4O95219 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX4O95219 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX4O95219 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX4O95219 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX4O95219 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.97■□□□□ 0.79
SNX4O95219 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX4O95219 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX4O95219 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX4O95219 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX4O95219 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX4O95219 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.97■□□□□ 0.79
SNX4O95219 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.97■□□□□ 0.79
SNX4O95219 ESRRAP2-201ENST00000418437 1549 ntBASIC19.97■□□□□ 0.79
SNX4O95219 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SNX4O95219 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.96■□□□□ 0.79
SNX4O95219 AL354811.1-201ENST00000610286 706 ntBASIC19.96■□□□□ 0.79
SNX4O95219 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX4O95219 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.96■□□□□ 0.79
SNX4O95219 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
SNX4O95219 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SNX4O95219 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX4O95219 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.95■□□□□ 0.78
SNX4O95219 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNX4O95219 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.95■□□□□ 0.78
SNX4O95219 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX4O95219 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX4O95219 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SNX4O95219 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX4O95219 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX4O95219 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SNX4O95219 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX4O95219 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms