Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
LTN1O94822 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
LTN1O94822 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
LTN1O94822 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
LTN1O94822 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
LTN1O94822 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
LTN1O94822 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC28.71■■■□□ 2.19
LTN1O94822 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
LTN1O94822 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
LTN1O94822 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
LTN1O94822 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
LTN1O94822 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.19
LTN1O94822 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC28.7■■■□□ 2.19
LTN1O94822 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
LTN1O94822 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC28.7■■■□□ 2.19
LTN1O94822 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC28.7■■■□□ 2.19
LTN1O94822 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC28.7■■■□□ 2.19
LTN1O94822 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
LTN1O94822 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
LTN1O94822 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
LTN1O94822 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
LTN1O94822 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
LTN1O94822 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC28.7■■■□□ 2.18
LTN1O94822 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
LTN1O94822 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC28.7■■■□□ 2.18
LTN1O94822 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
LTN1O94822 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
LTN1O94822 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTN1O94822 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC28.69■■■□□ 2.18
LTN1O94822 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTN1O94822 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTN1O94822 AC053503.5-201ENST00000601508 636 ntBASIC28.69■■■□□ 2.18
LTN1O94822 AC083880.1-201ENST00000608266 535 ntBASIC28.69■■■□□ 2.18
LTN1O94822 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.69■■■□□ 2.18
LTN1O94822 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTN1O94822 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTN1O94822 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
LTN1O94822 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
LTN1O94822 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
LTN1O94822 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTN1O94822 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTN1O94822 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTN1O94822 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTN1O94822 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
LTN1O94822 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTN1O94822 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC28.68■■■□□ 2.18
LTN1O94822 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC28.68■■■□□ 2.18
LTN1O94822 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC28.68■■■□□ 2.18
LTN1O94822 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTN1O94822 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC28.68■■■□□ 2.18
LTN1O94822 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTN1O94822 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTN1O94822 AC087742.1-201ENST00000575880 1738 ntBASIC28.68■■■□□ 2.18
LTN1O94822 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
LTN1O94822 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
LTN1O94822 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
LTN1O94822 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC28.67■■■□□ 2.18
LTN1O94822 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
LTN1O94822 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC28.67■■■□□ 2.18
LTN1O94822 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
LTN1O94822 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
LTN1O94822 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
LTN1O94822 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.67■■■□□ 2.18
LTN1O94822 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.67■■■□□ 2.18
LTN1O94822 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
LTN1O94822 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC28.67■■■□□ 2.18
LTN1O94822 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC28.67■■■□□ 2.18
LTN1O94822 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
LTN1O94822 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC28.67■■■□□ 2.18
LTN1O94822 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
LTN1O94822 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
LTN1O94822 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.66■■■□□ 2.18
LTN1O94822 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC28.66■■■□□ 2.18
LTN1O94822 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
LTN1O94822 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC28.66■■■□□ 2.18
LTN1O94822 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.66■■■□□ 2.18
LTN1O94822 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC28.66■■■□□ 2.18
LTN1O94822 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
LTN1O94822 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.65■■■□□ 2.18
LTN1O94822 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC28.65■■■□□ 2.18
LTN1O94822 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC28.65■■■□□ 2.18
LTN1O94822 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC28.65■■■□□ 2.18
LTN1O94822 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LTN1O94822 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC28.65■■■□□ 2.18
LTN1O94822 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
LTN1O94822 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LTN1O94822 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LTN1O94822 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC28.65■■■□□ 2.18
LTN1O94822 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
LTN1O94822 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC28.65■■■□□ 2.18
LTN1O94822 SLC7A5P1-201ENST00000568957 537 ntBASIC28.65■■■□□ 2.18
LTN1O94822 FGF8-207ENST00000618991 856 ntTSL 3 BASIC28.65■■■□□ 2.18
LTN1O94822 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
LTN1O94822 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.64■■■□□ 2.18
LTN1O94822 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.64■■■□□ 2.18
LTN1O94822 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.64■■■□□ 2.18
LTN1O94822 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC28.64■■■□□ 2.18
LTN1O94822 TERF1P5-201ENST00000477545 1207 ntBASIC28.64■■■□□ 2.18
LTN1O94822 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC28.64■■■□□ 2.18
LTN1O94822 RNA5SP413-201ENST00000516373 109 ntBASIC28.64■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms