Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
KRT33AO76009 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT33AO76009 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT33AO76009 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.33■□□□□ 0.68
KRT33AO76009 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
KRT33AO76009 AP005435.1-201ENST00000529293 1178 ntBASIC19.33■□□□□ 0.68
KRT33AO76009 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.33■□□□□ 0.68
KRT33AO76009 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT33AO76009 CA15P2-201ENST00000611168 834 ntBASIC19.33■□□□□ 0.68
KRT33AO76009 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT33AO76009 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.33■□□□□ 0.68
KRT33AO76009 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT33AO76009 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KRT33AO76009 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT33AO76009 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT33AO76009 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT33AO76009 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KRT33AO76009 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT33AO76009 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT33AO76009 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT33AO76009 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.32■□□□□ 0.68
KRT33AO76009 SUDS3P1-201ENST00000505831 966 ntBASIC19.32■□□□□ 0.68
KRT33AO76009 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT33AO76009 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT33AO76009 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT33AO76009 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT33AO76009 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT33AO76009 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KRT33AO76009 AL031432.3-201ENST00000607698 485 ntBASIC19.31■□□□□ 0.68
KRT33AO76009 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT33AO76009 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT33AO76009 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT33AO76009 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
KRT33AO76009 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT33AO76009 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KRT33AO76009 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
KRT33AO76009 AC010141.3-201ENST00000456659 717 ntBASIC19.3■□□□□ 0.68
KRT33AO76009 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT33AO76009 AL031602.1-201ENST00000633169 911 ntBASIC19.3■□□□□ 0.68
KRT33AO76009 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT33AO76009 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KRT33AO76009 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KRT33AO76009 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT33AO76009 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT33AO76009 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT33AO76009 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KRT33AO76009 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT33AO76009 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT33AO76009 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT33AO76009 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT33AO76009 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KRT33AO76009 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT33AO76009 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
KRT33AO76009 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT33AO76009 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT33AO76009 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT33AO76009 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT33AO76009 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KRT33AO76009 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT33AO76009 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 TSPY26P-201ENST00000476365 1326 ntBASIC19.28■□□□□ 0.68
KRT33AO76009 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.28■□□□□ 0.68
KRT33AO76009 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT33AO76009 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT33AO76009 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
KRT33AO76009 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KRT33AO76009 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT33AO76009 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KRT33AO76009 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms