Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZIC3O60481 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZIC3O60481 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ZIC3O60481 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.34■□□□□ 0.69
ZIC3O60481 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ZIC3O60481 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.34■□□□□ 0.69
ZIC3O60481 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ZIC3O60481 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ZIC3O60481 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.34■□□□□ 0.69
ZIC3O60481 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ZIC3O60481 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZIC3O60481 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.34■□□□□ 0.69
ZIC3O60481 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZIC3O60481 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.33■□□□□ 0.68
ZIC3O60481 AC104564.3-201ENST00000582367 638 ntBASIC19.33■□□□□ 0.68
ZIC3O60481 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.33■□□□□ 0.68
ZIC3O60481 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.33■□□□□ 0.68
ZIC3O60481 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZIC3O60481 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZIC3O60481 ECEL1P1-201ENST00000373592 1742 ntBASIC19.33■□□□□ 0.68
ZIC3O60481 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZIC3O60481 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
ZIC3O60481 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.33■□□□□ 0.68
ZIC3O60481 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.33■□□□□ 0.68
ZIC3O60481 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZIC3O60481 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZIC3O60481 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZIC3O60481 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
ZIC3O60481 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZIC3O60481 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZIC3O60481 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.32■□□□□ 0.68
ZIC3O60481 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZIC3O60481 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.32■□□□□ 0.68
ZIC3O60481 AC022517.1-201ENST00000592429 346 ntBASIC19.32■□□□□ 0.68
ZIC3O60481 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.32■□□□□ 0.68
ZIC3O60481 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZIC3O60481 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.32■□□□□ 0.68
ZIC3O60481 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZIC3O60481 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
ZIC3O60481 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 KRT87P-202ENST00000534226 1464 ntBASIC19.31■□□□□ 0.68
ZIC3O60481 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.31■□□□□ 0.68
ZIC3O60481 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.31■□□□□ 0.68
ZIC3O60481 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.31■□□□□ 0.68
ZIC3O60481 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.31■□□□□ 0.68
ZIC3O60481 AC092666.2-201ENST00000613287 246 ntBASIC19.31■□□□□ 0.68
ZIC3O60481 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.31■□□□□ 0.68
ZIC3O60481 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZIC3O60481 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
ZIC3O60481 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZIC3O60481 AC026471.6-201ENST00000622954 1905 ntBASIC19.3■□□□□ 0.68
ZIC3O60481 AL117328.2-201ENST00000624617 1940 ntBASIC19.3■□□□□ 0.68
ZIC3O60481 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZIC3O60481 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.3■□□□□ 0.68
ZIC3O60481 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.3■□□□□ 0.68
ZIC3O60481 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.3■□□□□ 0.68
ZIC3O60481 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.3■□□□□ 0.68
ZIC3O60481 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZIC3O60481 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZIC3O60481 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZIC3O60481 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ZIC3O60481 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.29■□□□□ 0.68
ZIC3O60481 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZIC3O60481 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZIC3O60481 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZIC3O60481 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
ZIC3O60481 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZIC3O60481 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.29■□□□□ 0.68
ZIC3O60481 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.29■□□□□ 0.68
ZIC3O60481 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.29■□□□□ 0.68
ZIC3O60481 FAM99A-202ENST00000538190 1989 ntBASIC19.29■□□□□ 0.68
ZIC3O60481 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZIC3O60481 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZIC3O60481 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZIC3O60481 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.29■□□□□ 0.68
ZIC3O60481 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ZIC3O60481 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZIC3O60481 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms