Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.72■■□□□ 1.23
TBC1D4O60343 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.72■■□□□ 1.23
TBC1D4O60343 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.72■■□□□ 1.23
TBC1D4O60343 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
TBC1D4O60343 EEF1DP3-203ENST00000566025 782 ntBASIC22.72■■□□□ 1.23
TBC1D4O60343 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.72■■□□□ 1.23
TBC1D4O60343 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D4O60343 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.72■■□□□ 1.23
TBC1D4O60343 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
TBC1D4O60343 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.71■■□□□ 1.23
TBC1D4O60343 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.71■■□□□ 1.23
TBC1D4O60343 NCF1B-203ENST00000435988 1254 ntBASIC22.71■■□□□ 1.23
TBC1D4O60343 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
TBC1D4O60343 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.71■■□□□ 1.23
TBC1D4O60343 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D4O60343 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D4O60343 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D4O60343 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
TBC1D4O60343 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.7■■□□□ 1.22
TBC1D4O60343 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D4O60343 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D4O60343 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D4O60343 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.7■■□□□ 1.22
TBC1D4O60343 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D4O60343 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.7■■□□□ 1.22
TBC1D4O60343 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D4O60343 MYCNOS-205ENST00000641950 531 ntBASIC22.7■■□□□ 1.22
TBC1D4O60343 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D4O60343 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D4O60343 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.7■■□□□ 1.22
TBC1D4O60343 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D4O60343 AC139530.1-201ENST00000575312 1977 ntBASIC22.7■■□□□ 1.22
TBC1D4O60343 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.69■■□□□ 1.22
TBC1D4O60343 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D4O60343 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D4O60343 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.69■■□□□ 1.22
TBC1D4O60343 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D4O60343 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D4O60343 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D4O60343 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.69■■□□□ 1.22
TBC1D4O60343 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D4O60343 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TBC1D4O60343 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
TBC1D4O60343 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D4O60343 KRT18P20-201ENST00000548986 1279 ntBASIC22.69■■□□□ 1.22
TBC1D4O60343 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D4O60343 AC104771.1-201ENST00000603335 964 ntBASIC22.69■■□□□ 1.22
TBC1D4O60343 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.69■■□□□ 1.22
TBC1D4O60343 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
TBC1D4O60343 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.68■■□□□ 1.22
TBC1D4O60343 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
TBC1D4O60343 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
TBC1D4O60343 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D4O60343 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D4O60343 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.67■■□□□ 1.22
TBC1D4O60343 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.67■■□□□ 1.22
TBC1D4O60343 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D4O60343 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D4O60343 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TBC1D4O60343 AC006970.2-201ENST00000450065 779 ntBASIC22.67■■□□□ 1.22
TBC1D4O60343 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.67■■□□□ 1.22
TBC1D4O60343 AC053503.5-201ENST00000601508 636 ntBASIC22.67■■□□□ 1.22
TBC1D4O60343 AL050303.2-201ENST00000619798 666 ntBASIC22.67■■□□□ 1.22
TBC1D4O60343 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D4O60343 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D4O60343 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D4O60343 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D4O60343 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
TBC1D4O60343 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.66■■□□□ 1.22
TBC1D4O60343 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.66■■□□□ 1.22
TBC1D4O60343 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.66■■□□□ 1.22
TBC1D4O60343 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TBC1D4O60343 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.66■■□□□ 1.22
TBC1D4O60343 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 MIR663A-201ENST00000385250 93 ntBASIC22.66■■□□□ 1.22
TBC1D4O60343 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.66■■□□□ 1.22
TBC1D4O60343 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.66■■□□□ 1.22
TBC1D4O60343 AC231657.2-201ENST00000624556 255 ntBASIC22.66■■□□□ 1.22
TBC1D4O60343 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.66■■□□□ 1.22
TBC1D4O60343 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D4O60343 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TBC1D4O60343 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms