Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.61■■□□□ 1.37
NCK2O43639 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NCK2O43639 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NCK2O43639 AC006970.2-201ENST00000450065 779 ntBASIC23.61■■□□□ 1.37
NCK2O43639 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.61■■□□□ 1.37
NCK2O43639 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NCK2O43639 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NCK2O43639 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NCK2O43639 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.61■■□□□ 1.37
NCK2O43639 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NCK2O43639 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.6■■□□□ 1.37
NCK2O43639 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
NCK2O43639 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 AC139530.1-201ENST00000575312 1977 ntBASIC23.6■■□□□ 1.37
NCK2O43639 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.6■■□□□ 1.37
NCK2O43639 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.6■■□□□ 1.37
NCK2O43639 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.6■■□□□ 1.37
NCK2O43639 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.6■■□□□ 1.37
NCK2O43639 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
NCK2O43639 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
NCK2O43639 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NCK2O43639 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.6■■□□□ 1.37
NCK2O43639 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NCK2O43639 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
NCK2O43639 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.59■■□□□ 1.37
NCK2O43639 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.59■■□□□ 1.37
NCK2O43639 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.59■■□□□ 1.37
NCK2O43639 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NCK2O43639 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.59■■□□□ 1.37
NCK2O43639 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.59■■□□□ 1.37
NCK2O43639 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.59■■□□□ 1.37
NCK2O43639 AC010525.1-201ENST00000585559 441 ntBASIC23.59■■□□□ 1.37
NCK2O43639 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.59■■□□□ 1.37
NCK2O43639 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.59■■□□□ 1.37
NCK2O43639 AL109923.1-201ENST00000618799 583 ntBASIC23.59■■□□□ 1.37
NCK2O43639 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.59■■□□□ 1.37
NCK2O43639 FP325331.1-202ENST00000623531 1380 ntBASIC23.59■■□□□ 1.37
NCK2O43639 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NCK2O43639 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NCK2O43639 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.59■■□□□ 1.37
NCK2O43639 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NCK2O43639 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NCK2O43639 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NCK2O43639 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.58■■□□□ 1.37
NCK2O43639 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NCK2O43639 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NCK2O43639 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
NCK2O43639 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NCK2O43639 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.58■■□□□ 1.37
NCK2O43639 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
NCK2O43639 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NCK2O43639 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.58■■□□□ 1.37
NCK2O43639 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
NCK2O43639 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NCK2O43639 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.58■■□□□ 1.37
NCK2O43639 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.58■■□□□ 1.37
NCK2O43639 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.58■■□□□ 1.37
NCK2O43639 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.58■■□□□ 1.37
NCK2O43639 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.58■■□□□ 1.37
NCK2O43639 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
NCK2O43639 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NCK2O43639 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NCK2O43639 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
NCK2O43639 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NCK2O43639 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NCK2O43639 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NCK2O43639 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NCK2O43639 AC080038.3-201ENST00000623346 1952 ntBASIC23.57■■□□□ 1.36
NCK2O43639 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NCK2O43639 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NCK2O43639 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NCK2O43639 AL137060.1-201ENST00000618151 2648 ntBASIC23.57■■□□□ 1.36
NCK2O43639 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NCK2O43639 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NCK2O43639 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
NCK2O43639 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.56■■□□□ 1.36
NCK2O43639 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.56■■□□□ 1.36
NCK2O43639 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.56■■□□□ 1.36
NCK2O43639 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NCK2O43639 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.56■■□□□ 1.36
NCK2O43639 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.56■■□□□ 1.36
NCK2O43639 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
NCK2O43639 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms