Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFSF11O14788 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TNFSF11O14788 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.24■□□□□ 0.67
TNFSF11O14788 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFSF11O14788 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFSF11O14788 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF11O14788 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TNFSF11O14788 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TNFSF11O14788 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF11O14788 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF11O14788 AP006587.3-201ENST00000525742 1516 ntBASIC19.23■□□□□ 0.67
TNFSF11O14788 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFSF11O14788 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF11O14788 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TNFSF11O14788 ECEL1P1-201ENST00000373592 1742 ntBASIC19.22■□□□□ 0.67
TNFSF11O14788 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TNFSF11O14788 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TNFSF11O14788 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFSF11O14788 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF11O14788 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TNFSF11O14788 AC079140.4-201ENST00000507448 529 ntBASIC19.22■□□□□ 0.67
TNFSF11O14788 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFSF11O14788 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TNFSF11O14788 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF11O14788 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF11O14788 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF11O14788 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF11O14788 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF11O14788 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF11O14788 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TNFSF11O14788 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF11O14788 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TNFSF11O14788 AC055733.4-201ENST00000638462 1354 ntBASIC19.21■□□□□ 0.67
TNFSF11O14788 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF11O14788 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF11O14788 AL162430.1-201ENST00000480705 870 ntBASIC19.21■□□□□ 0.67
TNFSF11O14788 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF11O14788 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF11O14788 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF11O14788 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF11O14788 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.21■□□□□ 0.67
TNFSF11O14788 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFSF11O14788 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF11O14788 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF11O14788 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNFSF11O14788 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF11O14788 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF11O14788 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF11O14788 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
TNFSF11O14788 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNFSF11O14788 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF11O14788 FAM99A-202ENST00000538190 1989 ntBASIC19.19■□□□□ 0.66
TNFSF11O14788 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF11O14788 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF11O14788 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF11O14788 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.19■□□□□ 0.66
TNFSF11O14788 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TNFSF11O14788 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFSF11O14788 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.19■□□□□ 0.66
TNFSF11O14788 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFSF11O14788 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF11O14788 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms