Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDX4O14627 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.88■□□□□ 0.93
CDX4O14627 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.88■□□□□ 0.93
CDX4O14627 AC079089.2-201ENST00000531211 1277 ntBASIC20.88■□□□□ 0.93
CDX4O14627 AC053503.5-201ENST00000601508 636 ntBASIC20.88■□□□□ 0.93
CDX4O14627 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.88■□□□□ 0.93
CDX4O14627 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDX4O14627 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDX4O14627 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDX4O14627 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.87■□□□□ 0.93
CDX4O14627 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDX4O14627 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.87■□□□□ 0.93
CDX4O14627 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.87■□□□□ 0.93
CDX4O14627 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.87■□□□□ 0.93
CDX4O14627 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.87■□□□□ 0.93
CDX4O14627 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.87■□□□□ 0.93
CDX4O14627 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 AC004812.2-201ENST00000611079 2094 ntBASIC20.87■□□□□ 0.93
CDX4O14627 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDX4O14627 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.87■□□□□ 0.93
CDX4O14627 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDX4O14627 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDX4O14627 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDX4O14627 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDX4O14627 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.86■□□□□ 0.93
CDX4O14627 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.86■□□□□ 0.93
CDX4O14627 AC026366.1-201ENST00000488803 879 ntBASIC20.86■□□□□ 0.93
CDX4O14627 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.86■□□□□ 0.93
CDX4O14627 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CDX4O14627 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDX4O14627 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDX4O14627 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDX4O14627 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDX4O14627 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDX4O14627 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDX4O14627 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
CDX4O14627 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDX4O14627 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.85■□□□□ 0.93
CDX4O14627 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.85■□□□□ 0.93
CDX4O14627 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDX4O14627 AC008550.1-201ENST00000511500 884 ntBASIC20.85■□□□□ 0.93
CDX4O14627 UNC93B5-201ENST00000530315 699 ntBASIC20.85■□□□□ 0.93
CDX4O14627 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.85■□□□□ 0.93
CDX4O14627 AC073648.6-201ENST00000641589 218 ntBASIC20.85■□□□□ 0.93
CDX4O14627 AC010980.2-201ENST00000587099 1412 ntBASIC20.85■□□□□ 0.93
CDX4O14627 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.85■□□□□ 0.93
CDX4O14627 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.84■□□□□ 0.93
CDX4O14627 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.84■□□□□ 0.93
CDX4O14627 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.84■□□□□ 0.93
CDX4O14627 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.84■□□□□ 0.93
CDX4O14627 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.84■□□□□ 0.93
CDX4O14627 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.84■□□□□ 0.93
CDX4O14627 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.84■□□□□ 0.93
CDX4O14627 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDX4O14627 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CDX4O14627 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDX4O14627 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.83■□□□□ 0.93
CDX4O14627 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDX4O14627 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.83■□□□□ 0.93
CDX4O14627 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.83■□□□□ 0.93
CDX4O14627 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDX4O14627 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDX4O14627 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.83■□□□□ 0.92
CDX4O14627 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDX4O14627 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.83■□□□□ 0.92
CDX4O14627 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDX4O14627 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDX4O14627 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.82■□□□□ 0.92
CDX4O14627 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDX4O14627 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.82■□□□□ 0.92
CDX4O14627 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.82■□□□□ 0.92
CDX4O14627 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDX4O14627 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDX4O14627 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDX4O14627 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDX4O14627 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDX4O14627 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDX4O14627 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms