Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CACNB4O00305 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CACNB4O00305 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.17■□□□□ 0.98
CACNB4O00305 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.17■□□□□ 0.98
CACNB4O00305 AC090192.1-201ENST00000517740 490 ntBASIC21.17■□□□□ 0.98
CACNB4O00305 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.17■□□□□ 0.98
CACNB4O00305 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.17■□□□□ 0.98
CACNB4O00305 AC104187.1-201ENST00000607510 612 ntBASIC21.17■□□□□ 0.98
CACNB4O00305 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.17■□□□□ 0.98
CACNB4O00305 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CACNB4O00305 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CACNB4O00305 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CACNB4O00305 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.17■□□□□ 0.98
CACNB4O00305 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CACNB4O00305 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CACNB4O00305 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.17■□□□□ 0.98
CACNB4O00305 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CACNB4O00305 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.16■□□□□ 0.98
CACNB4O00305 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNB4O00305 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNB4O00305 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CACNB4O00305 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNB4O00305 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNB4O00305 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CACNB4O00305 KRT18P11-201ENST00000435214 1283 ntBASIC21.16■□□□□ 0.98
CACNB4O00305 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.16■□□□□ 0.98
CACNB4O00305 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNB4O00305 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNB4O00305 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNB4O00305 AP006587.3-201ENST00000525742 1516 ntBASIC21.15■□□□□ 0.98
CACNB4O00305 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.15■□□□□ 0.98
CACNB4O00305 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CACNB4O00305 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.15■□□□□ 0.98
CACNB4O00305 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CACNB4O00305 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CACNB4O00305 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CACNB4O00305 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CACNB4O00305 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.15■□□□□ 0.98
CACNB4O00305 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CACNB4O00305 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.14■□□□□ 0.98
CACNB4O00305 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CACNB4O00305 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.14■□□□□ 0.98
CACNB4O00305 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CACNB4O00305 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.98
CACNB4O00305 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CACNB4O00305 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CACNB4O00305 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.14■□□□□ 0.97
CACNB4O00305 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CACNB4O00305 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CACNB4O00305 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CACNB4O00305 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CACNB4O00305 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.14■□□□□ 0.97
CACNB4O00305 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CACNB4O00305 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CACNB4O00305 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.14■□□□□ 0.97
CACNB4O00305 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CACNB4O00305 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.13■□□□□ 0.97
CACNB4O00305 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CACNB4O00305 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.13■□□□□ 0.97
CACNB4O00305 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.13■□□□□ 0.97
CACNB4O00305 BID-214ENST00000617586 542 ntTSL 5 BASIC21.13■□□□□ 0.97
CACNB4O00305 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.13■□□□□ 0.97
CACNB4O00305 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CACNB4O00305 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB4O00305 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB4O00305 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CACNB4O00305 C1orf229-201ENST00000623686 2258 ntBASIC21.12■□□□□ 0.97
CACNB4O00305 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB4O00305 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB4O00305 AC080038.1-201ENST00000611274 1154 ntBASIC21.12■□□□□ 0.97
CACNB4O00305 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNB4O00305 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB4O00305 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNB4O00305 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNB4O00305 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNB4O00305 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.11■□□□□ 0.97
CACNB4O00305 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB4O00305 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
CACNB4O00305 C9orf163-202ENST00000624034 2573 ntBASIC21.1■□□□□ 0.97
CACNB4O00305 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB4O00305 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB4O00305 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CACNB4O00305 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms