Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC1O00299 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC1O00299 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC1O00299 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC1O00299 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC1O00299 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC1O00299 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.16■□□□□ 0.82
CLIC1O00299 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC1O00299 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC1O00299 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC1O00299 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC1O00299 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC1O00299 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC1O00299 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLIC1O00299 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLIC1O00299 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.15■□□□□ 0.82
CLIC1O00299 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.15■□□□□ 0.82
CLIC1O00299 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.15■□□□□ 0.82
CLIC1O00299 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 OXCT2P1-201ENST00000447263 1535 ntBASIC20.15■□□□□ 0.82
CLIC1O00299 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC1O00299 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.15■□□□□ 0.82
CLIC1O00299 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CLIC1O00299 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLIC1O00299 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLIC1O00299 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.14■□□□□ 0.81
CLIC1O00299 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC1O00299 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.14■□□□□ 0.81
CLIC1O00299 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC1O00299 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC1O00299 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CLIC1O00299 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC1O00299 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLIC1O00299 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.14■□□□□ 0.81
CLIC1O00299 AC010525.1-201ENST00000585559 441 ntBASIC20.14■□□□□ 0.81
CLIC1O00299 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.14■□□□□ 0.81
CLIC1O00299 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC1O00299 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC1O00299 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.14■□□□□ 0.81
CLIC1O00299 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC1O00299 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC1O00299 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC1O00299 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLIC1O00299 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC1O00299 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLIC1O00299 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.13■□□□□ 0.81
CLIC1O00299 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC1O00299 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC1O00299 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.13■□□□□ 0.81
CLIC1O00299 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC1O00299 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC1O00299 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLIC1O00299 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CLIC1O00299 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
CLIC1O00299 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 AL512631.2-201ENST00000604634 923 ntBASIC20.12■□□□□ 0.81
CLIC1O00299 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC1O00299 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC1O00299 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC1O00299 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC1O00299 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CLIC1O00299 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC1O00299 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC1O00299 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.11■□□□□ 0.81
CLIC1O00299 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC1O00299 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.11■□□□□ 0.81
CLIC1O00299 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.11■□□□□ 0.81
CLIC1O00299 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC1O00299 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC1O00299 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC1O00299 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLIC1O00299 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CLIC1O00299 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CLIC1O00299 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.1■□□□□ 0.81
CLIC1O00299 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLIC1O00299 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC1O00299 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC1O00299 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLIC1O00299 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC1O00299 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.1■□□□□ 0.81
CLIC1O00299 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.1■□□□□ 0.81
CLIC1O00299 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms