Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.63■■□□□ 1.05
AP3B1O00203 AC135279.3-201ENST00000610945 1311 ntBASIC21.63■■□□□ 1.05
AP3B1O00203 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP3B1O00203 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
AP3B1O00203 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.63■■□□□ 1.05
AP3B1O00203 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.63■■□□□ 1.05
AP3B1O00203 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
AP3B1O00203 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
AP3B1O00203 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP3B1O00203 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP3B1O00203 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
AP3B1O00203 AC007375.3-201ENST00000600936 2314 ntBASIC21.62■■□□□ 1.05
AP3B1O00203 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP3B1O00203 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP3B1O00203 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
AP3B1O00203 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
AP3B1O00203 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.62■■□□□ 1.05
AP3B1O00203 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
AP3B1O00203 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.62■■□□□ 1.05
AP3B1O00203 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP3B1O00203 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
AP3B1O00203 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.61■■□□□ 1.05
AP3B1O00203 AC008406.3-201ENST00000620001 1374 ntBASIC21.61■■□□□ 1.05
AP3B1O00203 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3B1O00203 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP3B1O00203 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3B1O00203 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP3B1O00203 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3B1O00203 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP3B1O00203 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
AP3B1O00203 AC133561.4-201ENST00000566112 224 ntBASIC21.61■■□□□ 1.05
AP3B1O00203 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
AP3B1O00203 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
AP3B1O00203 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
AP3B1O00203 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP3B1O00203 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
AP3B1O00203 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.6■■□□□ 1.05
AP3B1O00203 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP3B1O00203 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.6■■□□□ 1.05
AP3B1O00203 AC024257.2-201ENST00000549699 147 ntBASIC21.6■■□□□ 1.05
AP3B1O00203 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.6■■□□□ 1.05
AP3B1O00203 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP3B1O00203 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP3B1O00203 AC026310.3-201ENST00000625186 2373 ntBASIC21.6■■□□□ 1.05
AP3B1O00203 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.6■■□□□ 1.05
AP3B1O00203 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
AP3B1O00203 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
AP3B1O00203 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.59■■□□□ 1.05
AP3B1O00203 AC126544.1-201ENST00000580842 1059 ntBASIC21.59■■□□□ 1.05
AP3B1O00203 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.59■■□□□ 1.05
AP3B1O00203 Z98882.1-201ENST00000622160 2253 ntBASIC21.59■■□□□ 1.05
AP3B1O00203 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
AP3B1O00203 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.59■■□□□ 1.05
AP3B1O00203 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AP3B1O00203 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AP3B1O00203 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.58■■□□□ 1.05
AP3B1O00203 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.58■■□□□ 1.05
AP3B1O00203 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AP3B1O00203 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AP3B1O00203 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
AP3B1O00203 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
AP3B1O00203 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AP3B1O00203 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.58■■□□□ 1.04
AP3B1O00203 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
AP3B1O00203 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
AP3B1O00203 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
AP3B1O00203 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AP3B1O00203 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
AP3B1O00203 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.57■■□□□ 1.04
AP3B1O00203 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
AP3B1O00203 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.57■■□□□ 1.04
AP3B1O00203 IGHV3-19-201ENST00000521488 291 ntBASIC21.57■■□□□ 1.04
AP3B1O00203 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.57■■□□□ 1.04
AP3B1O00203 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
AP3B1O00203 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
AP3B1O00203 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.57■■□□□ 1.04
AP3B1O00203 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.57■■□□□ 1.04
AP3B1O00203 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AP3B1O00203 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
AP3B1O00203 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.57■■□□□ 1.04
AP3B1O00203 AC026471.6-201ENST00000622954 1905 ntBASIC21.57■■□□□ 1.04
AP3B1O00203 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.56■■□□□ 1.04
AP3B1O00203 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
AP3B1O00203 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.56■■□□□ 1.04
AP3B1O00203 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.56■■□□□ 1.04
AP3B1O00203 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.56■■□□□ 1.04
AP3B1O00203 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP3B1O00203 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP3B1O00203 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP3B1O00203 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.55■■□□□ 1.04
AP3B1O00203 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms