Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM43BA6NCK2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM43BA6NCK2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM43BA6NCK2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM43BA6NCK2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 UNC93B4-201ENST00000505679 747 ntBASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 AC091874.3-201ENST00000512672 1195 ntBASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TRIM43BA6NCK2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 EEF1DP3-203ENST00000566025 782 ntBASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
TRIM43BA6NCK2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM43BA6NCK2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM43BA6NCK2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM43BA6NCK2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM43BA6NCK2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM43BA6NCK2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM43BA6NCK2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 AP004607.7-201ENST00000527152 1677 ntBASIC23.54■■□□□ 1.36
TRIM43BA6NCK2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM43BA6NCK2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms