Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC29.33■■■□□ 2.29
SBNO1A3KN83 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC29.33■■■□□ 2.29
SBNO1A3KN83 AC016405.3-201ENST00000607710 860 ntBASIC29.33■■■□□ 2.29
SBNO1A3KN83 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
SBNO1A3KN83 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SBNO1A3KN83 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SBNO1A3KN83 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SBNO1A3KN83 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SBNO1A3KN83 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SBNO1A3KN83 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SBNO1A3KN83 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC29.32■■■□□ 2.28
SBNO1A3KN83 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SBNO1A3KN83 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SBNO1A3KN83 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SBNO1A3KN83 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC29.31■■■□□ 2.28
SBNO1A3KN83 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SBNO1A3KN83 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC29.31■■■□□ 2.28
SBNO1A3KN83 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SBNO1A3KN83 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SBNO1A3KN83 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SBNO1A3KN83 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SBNO1A3KN83 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SBNO1A3KN83 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
SBNO1A3KN83 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SBNO1A3KN83 AC053503.5-201ENST00000601508 636 ntBASIC29.3■■■□□ 2.28
SBNO1A3KN83 AC069236.1-201ENST00000604339 616 ntBASIC29.3■■■□□ 2.28
SBNO1A3KN83 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SBNO1A3KN83 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC29.3■■■□□ 2.28
SBNO1A3KN83 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SBNO1A3KN83 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC29.29■■■□□ 2.28
SBNO1A3KN83 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC29.29■■■□□ 2.28
SBNO1A3KN83 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SBNO1A3KN83 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC29.29■■■□□ 2.28
SBNO1A3KN83 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
SBNO1A3KN83 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
SBNO1A3KN83 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SBNO1A3KN83 RHEB-204ENST00000472642 900 ntTSL 3 BASIC29.28■■■□□ 2.28
SBNO1A3KN83 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
SBNO1A3KN83 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SBNO1A3KN83 AP004607.7-201ENST00000527152 1677 ntBASIC29.28■■■□□ 2.28
SBNO1A3KN83 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC29.27■■■□□ 2.28
SBNO1A3KN83 ESRRAP1-201ENST00000400596 1257 ntBASIC29.27■■■□□ 2.28
SBNO1A3KN83 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC29.27■■■□□ 2.28
SBNO1A3KN83 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
SBNO1A3KN83 IRX5-204ENST00000560154 879 ntTSL 5 BASIC29.27■■■□□ 2.28
SBNO1A3KN83 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC29.27■■■□□ 2.28
SBNO1A3KN83 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SBNO1A3KN83 AP006294.2-201ENST00000641667 209 ntBASIC29.27■■■□□ 2.28
SBNO1A3KN83 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SBNO1A3KN83 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
SBNO1A3KN83 BX276092.2-201ENST00000417668 665 ntBASIC29.26■■■□□ 2.28
SBNO1A3KN83 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC29.26■■■□□ 2.28
SBNO1A3KN83 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC29.26■■■□□ 2.28
SBNO1A3KN83 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
SBNO1A3KN83 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
SBNO1A3KN83 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
SBNO1A3KN83 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SBNO1A3KN83 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SBNO1A3KN83 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC29.26■■■□□ 2.27
SBNO1A3KN83 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC29.26■■■□□ 2.27
SBNO1A3KN83 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC29.26■■■□□ 2.27
SBNO1A3KN83 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC29.26■■■□□ 2.27
SBNO1A3KN83 AC008694.1-202ENST00000636953 945 ntBASIC29.26■■■□□ 2.27
SBNO1A3KN83 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SBNO1A3KN83 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SBNO1A3KN83 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SBNO1A3KN83 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
SBNO1A3KN83 GAS7-202ENST00000396115 929 ntTSL 5 BASIC29.25■■■□□ 2.27
SBNO1A3KN83 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC29.25■■■□□ 2.27
SBNO1A3KN83 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC29.25■■■□□ 2.27
SBNO1A3KN83 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SBNO1A3KN83 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SBNO1A3KN83 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC29.24■■■□□ 2.27
SBNO1A3KN83 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC29.24■■■□□ 2.27
SBNO1A3KN83 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SBNO1A3KN83 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
SBNO1A3KN83 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC29.24■■■□□ 2.27
SBNO1A3KN83 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC29.24■■■□□ 2.27
SBNO1A3KN83 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC29.24■■■□□ 2.27
SBNO1A3KN83 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC29.24■■■□□ 2.27
SBNO1A3KN83 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
SBNO1A3KN83 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
SBNO1A3KN83 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SBNO1A3KN83 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
SBNO1A3KN83 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SBNO1A3KN83 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC29.23■■■□□ 2.27
SBNO1A3KN83 AC091874.3-201ENST00000512672 1195 ntBASIC29.23■■■□□ 2.27
SBNO1A3KN83 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC29.23■■■□□ 2.27
SBNO1A3KN83 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC29.23■■■□□ 2.27
SBNO1A3KN83 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SBNO1A3KN83 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC29.23■■■□□ 2.27
SBNO1A3KN83 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms