Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	BUD27	YFL023W	2391 nt		5.22	□□□□□ -1.57
TY4B-P	A0A0B7P3V8	FMP30	YPL103C	1407 nt		5.22	□□□□□ -1.57
TY4B-P	A0A0B7P3V8	YDR261C-D	YDR261C-D	4815 nt		5.22	□□□□□ -1.57
TY4B-P	A0A0B7P3V8	RTK1	YDL025C	1863 nt		5.22	□□□□□ -1.57
TY4B-P	A0A0B7P3V8	HOM3	YER052C	1584 nt		5.21	□□□□□ -1.57
TY4B-P	A0A0B7P3V8	YJL049W	YJL049W	1353 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	MAG1	YER142C	891 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YHR130C	YHR130C	336 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	PRM10	YJL108C	1152 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YKL136W	YKL136W	399 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	RPL17A	YKL180W	555 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	SRP40	YKR092C	1221 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YLR050C	YLR050C	486 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YNL043C	YNL043C	321 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	CAT5	YOR125C	702 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YOR282W	YOR282W	321 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	ADF1	YCL058W-A	342 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	MDR1	YGR100W	2853 nt		5.21	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	PMS1	YNL082W	2622 nt		5.2	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YCL068C	YCL068C	783 nt		5.2	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YCR018C-A	YCR018C-A	255 nt		5.2	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	SAE3	YHR079C-A	276 nt		5.2	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	KTR2	YKR061W	1278 nt		5.2	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YMR315W	YMR315W	1050 nt		5.2	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	UBC4	YBR082C	447 nt		5.2	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	TPS3	YMR261C	3165 nt		5.2	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	SSZ1	YHR064C	1617 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	THI7	YLR237W	1797 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	RRP42	YDL111C	798 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	DPP1	YDR284C	870 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	TFB3	YDR460W	966 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YER119C-A	YER119C-A	372 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	GET1	YGL020C	708 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YIL175W	YIL175W	318 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YJL127C-B	YJL127C-B	159 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YLR297W	YLR297W	390 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	ARC18	YLR370C	537 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YMR153C-A	YMR153C-A	336 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	SWS2	YNL081C	432 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	TRS33	YOR115C	807 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	snR17a	snR17a	333 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YCL021W-A	YCL021W-A	378 nt		5.19	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	DED81	YHR019C	1665 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	CTK1	YKL139W	1587 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	HFD1	YMR110C	1599 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	ARP9	YMR033W	1404 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YDL163W	YDL163W	303 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YKR041W	YKR041W	753 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YMR173W-A	YMR173W-A	1185 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	PRP28	YDR243C	1767 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	GEP3	YOR205C	1671 nt		5.18	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	MDM34	YGL219C	1380 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	HAP1	YLR256W	4509 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	ERG11	YHR007C	1593 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YCR101C	YCR101C	549 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	COX26	YDR119W-A	201 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	BNA7	YDR428C	786 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	LPP1	YDR503C	825 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YJL028W	YJL028W	336 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YLR224W	YLR224W	1110 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YLR290C	YLR290C	834 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YAF9	YNL107W	681 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	PHO80	YOL001W	882 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YBL005W-A	YBL005W-A	1323 nt		5.17	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	SPH1	YLR313C	1593 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	AVT1	YJR001W	1809 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	IOC4	YMR044W	1428 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	OCT1	YKL134C	2319 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YDL240C-A	YDL240C-A	138 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	TVP15	YDR100W	432 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	RGI1	YER067W	486 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)C	tN(GUU)C	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)F	tN(GUU)F	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)G	tN(GUU)G	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)K	tN(GUU)K	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)L	tN(GUU)L	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)N1	tN(GUU)N1	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)N2	tN(GUU)N2	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)O1	tN(GUU)O1	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)O2	tN(GUU)O2	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	tN(GUU)P	tN(GUU)P	74 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	HSX1	tR(CCU)J	72 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	RAD33	YML011C	534 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	MRP21	YBL090W	534 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	MSN1	YOL116W	1149 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	RAD28	YDR030C	1521 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	CDC6	YJL194W	1542 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	MMT1	YMR177W	1533 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	UBP16	YPL072W	1500 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	MMP1	YLL061W	1752 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	YKL075C	YKL075C	1353 nt		5.16	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	PUT2	YHR037W	1728 nt		5.15	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	TIF4632	YGL049C	2745 nt		5.15	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	BRE2	YLR015W	1518 nt		5.15	□□□□□ -1.58
TY4B-P	A0A0B7P3V8	SPT2	YER161C	1002 nt		5.15	□□□□□ -1.59
TY4B-P	A0A0B7P3V8	YGR022C	YGR022C	330 nt		5.15	□□□□□ -1.59
TY4B-P	A0A0B7P3V8	YJL169W	YJL169W	369 nt		5.15	□□□□□ -1.59
TY4B-P	A0A0B7P3V8	YKL183C-A	YKL183C-A	213 nt		5.15	□□□□□ -1.59
TY4B-P	A0A0B7P3V8	SDO1	YLR022C	753 nt		5.15	□□□□□ -1.59
TY4B-P	A0A0B7P3V8	AHP1	YLR109W	531 nt		5.15	□□□□□ -1.59

Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms