Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV5A0A0B4J249 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 AC079089.2-201ENST00000531211 1277 ntBASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 KRT125P-201ENST00000546827 989 ntBASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV5A0A0B4J249 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV5A0A0B4J249 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRAV5A0A0B4J249 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TRAV5A0A0B4J249 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV5A0A0B4J249 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV5A0A0B4J249 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TRAV5A0A0B4J249 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV5A0A0B4J249 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 AC010997.5-201ENST00000609182 354 ntBASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV5A0A0B4J249 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 TSPY9P-201ENST00000440215 945 ntBASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 TSPY11P-201ENST00000442607 1045 ntBASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 AC104564.3-201ENST00000582367 638 ntBASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 MIR4787-201ENST00000607364 84 ntBASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 AL031602.1-201ENST00000633169 911 ntBASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV5A0A0B4J249 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms