Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 AC092171.4-201ENST00000609130 632 ntBASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 AC087239.1-201ENST00000622671 572 ntBASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV3A0A0B4J244 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV3A0A0B4J244 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.21■□□□□ 0.34
TRAV3A0A0B4J244 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV3A0A0B4J244 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 SYT6-210ENST00000641643 1587 ntBASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 OXCT2P1-201ENST00000447263 1535 ntBASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV3A0A0B4J244 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV3A0A0B4J244 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 AC104564.3-201ENST00000582367 638 ntBASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV3A0A0B4J244 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TRAV3A0A0B4J244 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms