Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 AC138907.5-202ENST00000569484 235 ntBASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 UBE2DNL-204ENST00000602536 740 ntBASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 RAP2CP1-201ENST00000605103 478 ntBASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRGV5A0A0B4J1U4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 AC010141.2-201ENST00000452426 721 ntBASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 MFSD11-216ENST00000590393 1141 ntBASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV5A0A0B4J1U4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV5A0A0B4J1U4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 AC053503.5-201ENST00000601508 636 ntBASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 MYCNOS-205ENST00000641950 531 ntBASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV5A0A0B4J1U4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 AC006970.2-201ENST00000450065 779 ntBASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 KRT18P20-201ENST00000548986 1279 ntBASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 EEF1DP3-203ENST00000566025 782 ntBASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.2■□□□□ 0.66
TRGV5A0A0B4J1U4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV5A0A0B4J1U4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms