Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 KRT18P20-201ENST00000548986 1279 ntBASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 AC231657.2-201ENST00000624556 255 ntBASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 AC139530.1-201ENST00000575312 1977 ntBASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV19A0A0A6YYK7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
TRAV19A0A0A6YYK7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 DUX4L16-201ENST00000555130 1264 ntBASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 EEF1DP3-203ENST00000566025 782 ntBASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRAV19A0A0A6YYK7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 NCF1B-203ENST00000435988 1254 ntBASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 AC053503.5-201ENST00000601508 636 ntBASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 AC104771.1-201ENST00000603335 964 ntBASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV19A0A0A6YYK7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 AC007322.1-201ENST00000426983 750 ntBASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 AL109923.1-201ENST00000618799 583 ntBASIC22.18■■□□□ 1.14
TRAV19A0A0A6YYK7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV19A0A0A6YYK7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.16■■□□□ 1.14
TRAV19A0A0A6YYK7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 GPX1P1-201ENST00000388829 606 ntBASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms