Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 TNXB-203ENST00000451343 3125 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 KCNE1B-203ENST00000622690 3149 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 ARHGAP6-205ENST00000380736 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 RBFOX2-203ENST00000397303 1354 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 CHRM2-204ENST00000453373 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 DIRAS1-201ENST00000323469 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LMO3Q8TAP4 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
LMO3Q8TAP4 AMER3-201ENST00000321420 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LMO3Q8TAP4 ASB11-203ENST00000480796 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LMO3Q8TAP4 CYP1B1-204ENST00000494864 1479 ntTSL 5 BASIC12.4□□□□□ -0.43
LMO3Q8TAP4 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
LMO3Q8TAP4 PGA3-201ENST00000325558 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LMO3Q8TAP4 TNFAIP1-201ENST00000226225 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 LINC00667-205ENST00000582008 3979 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 FAM92A-206ENST00000518322 4241 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 CHTF8-201ENST00000306585 2561 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 FBXL13-203ENST00000379308 2577 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 CNDP2-209ENST00000579847 2653 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 TREM1-201ENST00000244709 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 SEC24B-AS1-202ENST00000499713 1433 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 RALGAPA2-206ENST00000620717 1432 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 CARD14-201ENST00000344227 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 FBXO16-201ENST00000346498 1205 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC007249.1-201ENST00000404616 494 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 RN7SKP73-201ENST00000411075 292 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC008268.1-201ENST00000425887 1119 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC138392.1-201ENST00000427577 921 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 PRAC2-202ENST00000432056 504 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ADH5P4-201ENST00000433151 1110 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ST3GAL5-AS1-201ENST00000455121 783 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 SOX2-OT-201ENST00000460739 609 ntTSL 4 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 RN7SL398P-201ENST00000470244 298 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 RPLP0P2-204ENST00000490750 961 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC138819.1-201ENST00000509363 431 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC112722.1-201ENST00000514884 587 ntTSL 4 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 RNA5SP520-201ENST00000516506 113 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 RNA5SP523-201ENST00000516858 113 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ABCC6P2-201ENST00000526069 590 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC013489.2-201ENST00000558732 276 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 HPR-203ENST00000561690 634 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 TMEM208-210ENST00000565201 832 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC104758.4-201ENST00000565869 353 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC005086.1-201ENST00000566572 801 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC009005.1-202ENST00000588908 625 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ZNF226-214ENST00000589160 656 ntTSL 4 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AL121658.1-201ENST00000608489 712 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC011487.4-201ENST00000616855 525 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 AC073488.4-201ENST00000632688 757 ntBASIC12.39□□□□□ -0.43
LMO3Q8TAP4 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 NRIP2-201ENST00000337508 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 KCNJ3-203ENST00000544049 4523 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 MYOZ3-201ENST00000297130 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 NRF1-205ENST00000393232 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 PACSIN1-201ENST00000244458 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 PACSIN1-202ENST00000374043 4229 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 LIN28A-201ENST00000254231 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.39□□□□□ -0.43
LMO3Q8TAP4 ADGRG1-266ENST00000568908 3852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 FCRL6-203ENST00000368106 1306 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 LINC00974-201ENST00000456403 2141 ntTSL 2 BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 SCG2-201ENST00000305409 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LMO3Q8TAP4 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms