Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 RBMY2FP-201ENST00000303922 2042 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 WNT4-201ENST00000290167 3845 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 PTPRD-AS2-201ENST00000429581 2838 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 GABPB1-210ENST00000560825 1412 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MTHFRP42898 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC12.28□□□□□ -0.44
MTHFRP42898 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.27□□□□□ -0.44
MTHFRP42898 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 TPRX1-203ENST00000543508 1526 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 PDK3-202ENST00000441463 1921 ntTSL 2 BASIC12.27□□□□□ -0.44
MTHFRP42898 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.27□□□□□ -0.44
MTHFRP42898 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MTHFRP42898 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 CD3D-201ENST00000300692 861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 OR10V1-201ENST00000307552 930 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
MTHFRP42898 PRM1-201ENST00000312511 424 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 IGLV8OR8-1-201ENST00000399730 352 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 STEAP1B-202ENST00000406890 1193 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 AC097533.1-201ENST00000413478 479 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 PRAMEF29P-201ENST00000418187 1139 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 HM13-IT1-201ENST00000421894 356 ntTSL 3 BASIC12.27□□□□□ -0.45
MTHFRP42898 AL121972.2-202ENST00000429386 586 ntTSL 4 BASIC12.27□□□□□ -0.45
MTHFRP42898 MTND6P11-201ENST00000431890 483 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 SPTLC1P4-201ENST00000435997 260 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 RPE-214ENST00000452025 779 ntTSL 3 BASIC12.27□□□□□ -0.45
MTHFRP42898 HNRNPA3P8-201ENST00000474219 974 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 RN7SL68P-201ENST00000488078 310 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 TMA16-208ENST00000513134 747 ntTSL 3 BASIC12.27□□□□□ -0.45
MTHFRP42898 AC139713.1-201ENST00000515019 321 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 HNRNPA1P12-201ENST00000515379 961 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 ENY2-210ENST00000521662 562 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
MTHFRP42898 EIF1AD-207ENST00000529964 808 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
MTHFRP42898 MEOX1-204ENST00000549132 1152 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 AC055717.2-201ENST00000561864 577 ntTSL 4 BASIC12.27□□□□□ -0.45
MTHFRP42898 RAB11A-204ENST00000565075 711 ntTSL 2 BASIC12.27□□□□□ -0.45
MTHFRP42898 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC12.27□□□□□ -0.45
MTHFRP42898 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC12.27□□□□□ -0.45
MTHFRP42898 AC009005.1-202ENST00000588908 625 ntTSL 2 BASIC12.27□□□□□ -0.45
MTHFRP42898 AC011467.6-201ENST00000603174 320 ntBASIC12.27□□□□□ -0.45
MTHFRP42898 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
MTHFRP42898 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC12.27□□□□□ -0.45
MTHFRP42898 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC12.27□□□□□ -0.45
MTHFRP42898 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 TAF1A-AS1-201ENST00000413074 1313 ntTSL 2 BASIC12.27□□□□□ -0.45
MTHFRP42898 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
MTHFRP42898 PPP2R3C-201ENST00000261475 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC12.27□□□□□ -0.45
MTHFRP42898 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 RFPL2-201ENST00000248980 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 RFPL2-202ENST00000248983 1474 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
MTHFRP42898 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MTHFRP42898 AC012368.1-206ENST00000451350 1504 ntTSL 5 BASIC12.27□□□□□ -0.45
MTHFRP42898 KYAT3-201ENST00000260508 2070 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 C22orf23-201ENST00000249079 1560 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
MTHFRP42898 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 PTPRR-209ENST00000549308 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 PIGB-201ENST00000164305 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 OACYLP-201ENST00000417918 2208 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 NR2F2-203ENST00000421109 2214 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
MTHFRP42898 CETN3-201ENST00000283122 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MTHFRP42898 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 PDZK1IP1-202ENST00000371885 770 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
MTHFRP42898 MIR200B-201ENST00000384997 95 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 ARHGEF9-IT1-201ENST00000420917 394 ntTSL 5 BASIC12.26□□□□□ -0.45
MTHFRP42898 AC010745.1-201ENST00000444804 637 ntTSL 3 BASIC12.26□□□□□ -0.45
MTHFRP42898 RPSAP3-201ENST00000464073 887 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 AC069454.1-201ENST00000465845 468 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 RN7SL40P-201ENST00000474689 342 ntBASIC12.26□□□□□ -0.45
MTHFRP42898 BTF3L4-205ENST00000489308 794 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 AC122719.2-201ENST00000511936 420 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 AC008434.1-201ENST00000514201 549 ntTSL 3 BASIC12.26□□□□□ -0.45
MTHFRP42898 SLA-206ENST00000517648 896 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 AC040970.1-201ENST00000520885 483 ntTSL 2 BASIC12.26□□□□□ -0.45
MTHFRP42898 STMN4-206ENST00000522908 1004 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms