Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.51■□□□□ 0.87
AP4B1Q9Y6B7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP4B1Q9Y6B7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AP4B1Q9Y6B7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.51■□□□□ 0.87
AP4B1Q9Y6B7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
AP4B1Q9Y6B7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 AC007952.6-201ENST00000573168 2673 ntBASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 AC003957.1-201ENST00000625108 2673 ntBASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
AP4B1Q9Y6B7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 AC008406.3-201ENST00000620001 1374 ntBASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP4B1Q9Y6B7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP4B1Q9Y6B7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 AC131281.2-201ENST00000520478 145 ntBASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP4B1Q9Y6B7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.46■□□□□ 0.87
AP4B1Q9Y6B7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 AL512631.2-201ENST00000604634 923 ntBASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.45■□□□□ 0.86
AP4B1Q9Y6B7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 AF106564.1-201ENST00000607058 2553 ntBASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4B1Q9Y6B7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms