Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.78□□□□□ -0.04
SPCS1Q9Y6A9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.77□□□□□ -0.04
SPCS1Q9Y6A9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.77□□□□□ -0.05
SPCS1Q9Y6A9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS1Q9Y6A9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.77□□□□□ -0.05
SPCS1Q9Y6A9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS1Q9Y6A9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS1Q9Y6A9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SPCS1Q9Y6A9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 FEM1AP4-201ENST00000443167 1987 ntBASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPCS1Q9Y6A9 FZD10-202ENST00000539839 3282 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms