Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAI2Q9Y5P3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 AC027612.3-201ENST00000413684 1047 ntBASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 AL034346.1-201ENST00000568244 1277 ntBASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAI2Q9Y5P3 EP400NL-214ENST00000641289 2402 ntBASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 KRT18P5-201ENST00000436075 1291 ntBASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAI2Q9Y5P3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.7■■□□□ 1.06
RAI2Q9Y5P3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAI2Q9Y5P3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 AC004911.1-201ENST00000416316 871 ntBASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 AC009237.3-201ENST00000393279 1427 ntBASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAI2Q9Y5P3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 TPRG1LP1-201ENST00000598702 760 ntBASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAI2Q9Y5P3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAI2Q9Y5P3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms