Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
MLH3Q9UHC1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC32.35■■■□□ 2.77
MLH3Q9UHC1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC32.35■■■□□ 2.77
MLH3Q9UHC1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
MLH3Q9UHC1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC32.35■■■□□ 2.77
MLH3Q9UHC1 BX276092.2-201ENST00000417668 665 ntBASIC32.35■■■□□ 2.77
MLH3Q9UHC1 AC079089.2-201ENST00000531211 1277 ntBASIC32.35■■■□□ 2.77
MLH3Q9UHC1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC32.35■■■□□ 2.77
MLH3Q9UHC1 AC053503.5-201ENST00000601508 636 ntBASIC32.35■■■□□ 2.77
MLH3Q9UHC1 AP006294.2-201ENST00000641667 209 ntBASIC32.35■■■□□ 2.77
MLH3Q9UHC1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC32.35■■■□□ 2.77
MLH3Q9UHC1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
MLH3Q9UHC1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
MLH3Q9UHC1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC32.34■■■□□ 2.77
MLH3Q9UHC1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC32.34■■■□□ 2.77
MLH3Q9UHC1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC32.34■■■□□ 2.77
MLH3Q9UHC1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
MLH3Q9UHC1 AC091874.3-201ENST00000512672 1195 ntBASIC32.33■■■□□ 2.77
MLH3Q9UHC1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
MLH3Q9UHC1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
MLH3Q9UHC1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
MLH3Q9UHC1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
MLH3Q9UHC1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
MLH3Q9UHC1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
MLH3Q9UHC1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
MLH3Q9UHC1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
MLH3Q9UHC1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
MLH3Q9UHC1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC32.31■■■□□ 2.76
MLH3Q9UHC1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC32.31■■■□□ 2.76
MLH3Q9UHC1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC32.31■■■□□ 2.76
MLH3Q9UHC1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
MLH3Q9UHC1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
MLH3Q9UHC1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 AP004607.7-201ENST00000527152 1677 ntBASIC32.3■■■□□ 2.76
MLH3Q9UHC1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
MLH3Q9UHC1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC32.29■■■□□ 2.76
MLH3Q9UHC1 AL162412.1-201ENST00000567129 965 ntBASIC32.29■■■□□ 2.76
MLH3Q9UHC1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.28■■■□□ 2.76
MLH3Q9UHC1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
MLH3Q9UHC1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.28■■■□□ 2.76
MLH3Q9UHC1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.28■■■□□ 2.76
MLH3Q9UHC1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC32.28■■■□□ 2.76
MLH3Q9UHC1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.28■■■□□ 2.76
MLH3Q9UHC1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC32.28■■■□□ 2.76
MLH3Q9UHC1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC32.28■■■□□ 2.76
MLH3Q9UHC1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 AP006587.3-201ENST00000525742 1516 ntBASIC32.27■■■□□ 2.76
MLH3Q9UHC1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 AC006058.3-201ENST00000606217 1069 ntBASIC32.27■■■□□ 2.76
MLH3Q9UHC1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
MLH3Q9UHC1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
MLH3Q9UHC1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
MLH3Q9UHC1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.76
MLH3Q9UHC1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
MLH3Q9UHC1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
MLH3Q9UHC1 AC128676.1-201ENST00000454392 318 ntBASIC32.26■■■□□ 2.75
MLH3Q9UHC1 AC097658.1-201ENST00000475555 843 ntBASIC32.26■■■□□ 2.75
MLH3Q9UHC1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
MLH3Q9UHC1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.75
MLH3Q9UHC1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC32.26■■■□□ 2.75
MLH3Q9UHC1 AC008694.1-202ENST00000636953 945 ntBASIC32.26■■■□□ 2.75
MLH3Q9UHC1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
MLH3Q9UHC1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
MLH3Q9UHC1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
MLH3Q9UHC1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC32.25■■■□□ 2.75
MLH3Q9UHC1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
MLH3Q9UHC1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC32.25■■■□□ 2.75
MLH3Q9UHC1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
MLH3Q9UHC1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms