Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL391422.3-201ENST00000603791 2761 ntBASIC20.72■□□□□ 0.91
NDE1Q9NXR1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 LINC01006-201ENST00000333319 2292 ntBASIC20.71■□□□□ 0.91
NDE1Q9NXR1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDE1Q9NXR1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NDE1Q9NXR1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDE1Q9NXR1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 SNX5-217ENST00000606557 1087 ntBASIC20.69■□□□□ 0.9
NDE1Q9NXR1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDE1Q9NXR1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NDE1Q9NXR1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDE1Q9NXR1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDE1Q9NXR1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NDE1Q9NXR1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.65■□□□□ 0.9
NDE1Q9NXR1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDE1Q9NXR1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms