Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 PVT1_1.1-201ENST00000615125 194 ntBASIC19.4■□□□□ 0.7
HMG20AQ9NP66 AC012354.3-201ENST00000623734 483 ntBASIC19.4■□□□□ 0.7
HMG20AQ9NP66 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMG20AQ9NP66 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMG20AQ9NP66 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.39■□□□□ 0.7
HMG20AQ9NP66 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMG20AQ9NP66 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
HMG20AQ9NP66 FEM1AP4-201ENST00000443167 1987 ntBASIC19.39■□□□□ 0.7
HMG20AQ9NP66 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 AC120024.1-201ENST00000562672 995 ntBASIC19.39■□□□□ 0.69
HMG20AQ9NP66 AC010980.1-201ENST00000587192 1142 ntBASIC19.39■□□□□ 0.69
HMG20AQ9NP66 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMG20AQ9NP66 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 Z98882.1-201ENST00000622160 2253 ntBASIC19.38■□□□□ 0.69
HMG20AQ9NP66 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HMG20AQ9NP66 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 KRT18P24-201ENST00000344739 1156 ntBASIC19.37■□□□□ 0.69
HMG20AQ9NP66 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMG20AQ9NP66 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 AL020996.1-203ENST00000536896 2307 ntBASIC19.36■□□□□ 0.69
HMG20AQ9NP66 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms